RNA–Protein interactions for RNA: ENST00000461520.5

USP54-208, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best)

Gene USP54, Length 1,212 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-208ENST00000461520 AMELYQ99218 206 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 CCL13Q99616 98 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 CITED1Q99966 193 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 DCTN5Q9BTE1 182 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 CHID1Q9BWS9 393 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 C1orf21Q9H246 121 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 OR51V1Q9H2C8 321 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 DPAGT1Q9H3H5 408 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 NIPAL2Q9H841 368 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 ZNF556Q9HAH1 456 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 TNFRSF19Q9NS68 423 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 HAO2Q9NYQ3 351 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 DUX4Q9UBX2 424 aa5.94□□□□□ -1.46
USP54-208ENST00000461520 CAB39Q9Y376 341 aaPredicted RBP5.94□□□□□ -1.46
USP54-208ENST00000461520 A0A0U1RQK1 487 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 ZNF850A8MQ14 1090 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 ACOT8O14734 319 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 SELENOFO60613 162 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 IGHV4-59P01825 116 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 FBP1P09467 338 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 T-ENOLP0DO92 83 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 ANXA8P13928 327 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 EEF1B2P24534 225 aaKnown RBP5.93□□□□□ -1.46
USP54-208ENST00000461520 ACKR3P25106 362 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 POU1F1P28069 291 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 CDK5Q00535 292 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 PRDX4Q13162 271 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 GINS1Q14691 196 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 PLBD1Q6P4A8 553 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 DEGS2Q6QHC5 323 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 GDPGP1Q6ZNW5 385 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 C1orf122Q6ZSJ8 110 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 ZDHHC23Q8IYP9 409 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 FAM216BQ8N7L0 139 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 PAPD5Q8NDF8 572 aaKnown RBP5.93□□□□□ -1.46
USP54-208ENST00000461520 C8orf46Q8TAG6 207 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 CANT1Q8WVQ1 401 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 OR5P3Q8WZ94 311 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 PIGCQ92535 297 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 RPL3LQ92901 407 aaKnown RBP5.93□□□□□ -1.46
USP54-208ENST00000461520 CCDC124Q96CT7 223 aaKnown RBP5.93□□□□□ -1.46
USP54-208ENST00000461520 SEH1LQ96EE3 360 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 MED30Q96HR3 178 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 RNF170Q96K19 258 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 RAB3IPQ96QF0 476 aaPredicted RBP5.93□□□□□ -1.46
USP54-208ENST00000461520 PKP2Q99959 881 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 TEX12Q9BXU0 123 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 PPP1R3EQ9H7J1 279 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 TAS2R1Q9NYW7 299 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 PDP1Q9P0J1 537 aaPredicted RBP5.93□□□□□ -1.46
USP54-208ENST00000461520 ONECUT1Q9UBC0 465 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 DNAJB11Q9UBS4 358 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 FAM96BQ9Y3D0 163 aa5.93□□□□□ -1.46
USP54-208ENST00000461520 DOCK11Q5JSL3 2073 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 A0A0U1RQV5 110 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ZNF816-ZNF321PA0A0X1KG74 233 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 NKX6-3A6NJ46 265 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ACOD1A6NK06 481 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 M0QZ24 198 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 M0R1W7 72 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 TIMM23O14925 209 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 SIGLEC5O15389 551 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 AKR7A2O43488 359 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 GPR137BO60478 399 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 CLPXO76031 633 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 FAM107AO95990 144 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ATP6V1B1P15313 513 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ALOX5APP20292 161 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 DCTDP32321 178 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 CAV3P56539 151 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ELF3P78545 371 aaPredicted RBP5.92□□□□□ -1.46
USP54-208ENST00000461520 DGUOKQ16854 277 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 KCTD18Q6PI47 426 aaPredicted RBP5.92□□□□□ -1.46
USP54-208ENST00000461520 KCTD8Q6ZWB6 473 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 KRT77Q7Z794 578 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 TMEM179BQ7Z7N9 219 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 CPOQ8IVL8 374 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 PDZD9Q8IXQ8 264 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 FGFRL1Q8N441 504 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 Q8N7P7 452 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ZSCAN4Q8NAM6 433 aaPredicted RBP5.92□□□□□ -1.46
USP54-208ENST00000461520 CCDC197Q8NCU1 140 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 OR5T2Q8NGG2 359 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 OR8B12Q8NGG6 310 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 LINC01006Q8NI28 216 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ANGPTL6Q8NI99 470 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 HPSE2Q8WWQ2 592 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 TNFRSF14Q92956 283 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 LYZL4Q96KX0 146 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 THTPAQ9BU02 230 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 MROQ9BYG7 248 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 WDR13Q9H1Z4 485 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 MMP27Q9H306 513 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 YY1AP1Q9H869 796 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 SLC25A19Q9HC21 320 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 SIRT7Q9NRC8 400 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 ZNRD1Q9P1U0 126 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 NLKQ9UBE8 527 aa5.92□□□□□ -1.46
USP54-208ENST00000461520 SLC25A10Q9UBX3 287 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms