RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 FAM230AA0A1W2PPH8 454 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 C21orf140B9A014 251 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 H0YIZ8 118 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 RPL36A-HNRNPH2H7BZ11 118 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 H7C1Q1 480 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 TRIM77I1YAP6 450 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 DNASE2O00115 360 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 SDCBPO00560 298 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 ST8SIA3O43173 380 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 GPR137BO60478 399 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 SYNGR4O95473 234 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 GLAP06280 429 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 HOXB5P09067 269 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 HKR1P10072 659 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 TDGF1P13385 188 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 MMP9P14780 707 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 PAX6P26367 422 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 RBM11P57052 281 aaKnown RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 PIGPP57054 158 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 RND3P61587 244 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 FOXO1Q12778 655 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 PDZK1IP1Q13113 114 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 GNMTQ14749 295 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 RSPO1Q2MKA7 263 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 ACER2Q5QJU3 275 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 GGNBP1Q5YKI7 109 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 PLCXD3Q63HM9 321 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF774Q6NX45 483 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 CRIP3Q6Q6R5 217 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 C1QL2Q7Z5L3 287 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 OR8G5Q8NG78 346 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 OR10D3Q8NH80 312 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 RTN4IP1Q8WWV3 396 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 RRNAD1Q96FB5 475 aaKnown RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 ADGRG7Q96K78 797 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 OR10C1Q96KK4 312 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 DMRTA2Q96SC8 542 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 SMDT1Q9H4I9 107 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 GPR35Q9HC97 309 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 COQ3Q9NZJ6 369 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 OR5AC2Q9NZP5 309 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 LUZP4Q9P127 313 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 AK3Q9UIJ7 227 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 MCTS1Q9ULC4 181 aaKnown RBP7.69□□□□□ -1.18
HDAC3-202ENST00000459727 STARD10Q9Y365 291 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 PRELID3BQ9Y3B1 194 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 ZFHX4Q86UP3 3567 aa7.69□□□□□ -1.18
HDAC3-202ENST00000459727 TNRC6BQ9UPQ9 1833 aaKnown RBP7.68□□□□□ -1.18
HDAC3-202ENST00000459727 C19orf67A6NJJ6 358 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 LRRC3CA6NJW4 275 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF587BE7ETH6 402 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 E9PLN8 166 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 J3QW42 95 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 CXCL13O43927 109 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 MED6O75586 246 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 CELA2AP08217 269 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 FAM157CP0CG43 387 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 CCL4P13236 92 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF708P17019 499 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ACKR3P25106 362 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 GDF1P27539 372 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 FCGR2CP31995 323 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ARR3P36575 388 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 DVL1P1P54792 670 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-202ENST00000459727 PSG4Q00888 419 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF266Q14584 549 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 TMEM187Q14656 261 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 PEA15Q15121 130 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 CEACAM16Q2WEN9 425 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 TRIM61Q5EBN2 209 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 FAM76BQ5HYJ3 339 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 TMEM268Q5VZI3 342 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 DHRS7BQ6IAN0 325 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-202ENST00000459727 COLCA1Q6ZS62 124 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 MKXQ8IYA7 352 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ESX1Q8N693 406 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 IL22RA2Q969J5 263 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 APOBEC3DQ96AK3 386 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-202ENST00000459727 TAAR9Q96RI9 348 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 RSRP1Q9BUV0 290 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 PBDC1Q9BVG4 233 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 GPR87Q9BY21 358 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 WNT5BQ9H1J7 359 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ARV1Q9H2C2 271 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 UQCC1Q9NVA1 299 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 ST3GAL6Q9Y274 331 aa7.68□□□□□ -1.18
HDAC3-202ENST00000459727 NOSIPQ9Y314 301 aaKnown RBP7.68□□□□□ -1.18
HDAC3-202ENST00000459727 BTBD17A6NE02 478 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 MSGN1A6NI15 193 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF724A8MTY0 619 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 UMAD1C9J7I0 102 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 LRP3O75074 770 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 MRPL33O75394 65 aaKnown RBP7.67□□□□□ -1.18
HDAC3-202ENST00000459727 FBXO24O75426 580 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 TRAPPC6AO75865 159 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 TK1P04183 234 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 DBHP09172 617 aa7.67□□□□□ -1.18
HDAC3-202ENST00000459727 B4GALT1P15291 398 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms