RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ISOC2Q96AB3 205 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 GHRLQ9UBU3 117 aa12.29□□□□□ -0.44
SCFD1-203ENST00000458591 FOXD3Q9UJU5 478 aaPredicted RBP12.29□□□□□ -0.44
SCFD1-203ENST00000458591 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 TP53I11O14683 189 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 F10P00742 488 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 S100A6P06703 90 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 HABP2Q14520 560 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 SLC22A25Q6T423 547 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 C14orf79Q96F83 325 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 IP6K3Q96PC2 410 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 DKKL1Q9UK85 242 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 RCL1Q9Y2P8 373 aaKnown RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 JTBO76095 146 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 GAPDHP04406 335 aaKnown RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 LIFP15018 202 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 EPHA8P29322 1005 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 ZNF616Q08AN1 781 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 TMEM187Q14656 261 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 MIDNQ504T8 468 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 FBXL14Q8N1E6 418 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 TMEM156Q8N614 296 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 OR10AD1Q8NGE0 317 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 RTN4IP1Q8WWV3 396 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 METTL9Q9H1A3 318 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 PCED1AQ9H1Q7 454 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 C19orf25Q9UFG5 118 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-203ENST00000458591 CACFD1Q9UGQ2 172 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
SCFD1-203ENST00000458591 IGHV1-45A0A0A0MS14 117 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 LINC01387J3KSC0 135 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 K7ESF4 209 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 TOX3O15405 576 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-203ENST00000458591 SGCEO43556 437 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 IGHV3-9P01782 118 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 SNRNP70P08621 437 aaKnown RBP12.27□□□□□ -0.44
SCFD1-203ENST00000458591 ZNF728P0DKX0 622 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 ECI1P42126 302 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.44
SCFD1-203ENST00000458591 SLC23A3Q6PIS1 610 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 OPN5Q6U736 354 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 HSD17B11Q8NBQ5 300 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 MR1Q95460 341 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.44
SCFD1-203ENST00000458591 RPS10P5Q9NQ39 176 aa12.27□□□□□ -0.44
SCFD1-203ENST00000458591 CACNA1EQ15878 2313 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 SHANK1Q9Y566 2161 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 ZNF587BE7ETH6 402 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 IFNA21P01568 189 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 ACAA1P09110 424 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-203ENST00000458591 ZNF32P17041 273 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 CRYGSP22914 178 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-203ENST00000458591 SPTSSAQ969W0 71 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 EGLN1Q9GZT9 426 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 P4HTMQ9NXG6 502 aa12.27□□□□□ -0.45
SCFD1-203ENST00000458591 COL6A3P12111 3177 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 A0A1W2PPE3 182 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 RRP8O43159 456 aaKnown RBP12.26□□□□□ -0.45
SCFD1-203ENST00000458591 SYNGR3O43761 229 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 COX6A1P12074 109 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 CHATP28329 748 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 RNF212Q495C1 297 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 MEX3BQ6ZN04 569 aaKnown RBP12.26□□□□□ -0.45
SCFD1-203ENST00000458591 TCEAL3Q969E4 200 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 NAA60Q9H7X0 242 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 UBE2ZQ9H832 354 aaPredicted RBP12.26□□□□□ -0.45
SCFD1-203ENST00000458591 HS3ST3B1Q9Y662 390 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 RFPL3SP0C7P2 107 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 ZNF92Q03936 586 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 ARL6IP1Q15041 203 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 RBMS3Q6XE24 437 aaKnown RBP12.26□□□□□ -0.45
SCFD1-203ENST00000458591 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 COMMD1Q8N668 190 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 SAP25Q8TEE9 199 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 IMMP1LQ96LU5 166 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 ANGPTL4Q9BY76 406 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 ZMAT5Q9UDW3 170 aaKnown RBP12.26□□□□□ -0.45
SCFD1-203ENST00000458591 TIMM10BQ9Y5J6 103 aa12.26□□□□□ -0.45
SCFD1-203ENST00000458591 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
SCFD1-203ENST00000458591 NXPH3O95157 252 aa12.25□□□□□ -0.45
SCFD1-203ENST00000458591 TSPAN15O95858 294 aa12.25□□□□□ -0.45
SCFD1-203ENST00000458591 MT-ND4LP03901 98 aa12.25□□□□□ -0.45
SCFD1-203ENST00000458591 NPBWR2P48146 333 aa12.25□□□□□ -0.45
SCFD1-203ENST00000458591 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
SCFD1-203ENST00000458591 DSCR4P56555 118 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-203ENST00000458591 RPS18P62269 152 aaKnown RBP12.25□□□□□ -0.45
SCFD1-203ENST00000458591 EIF3IQ13347 325 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms