RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 OR5H8P0DN80 308 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 SLC2A2P11168 524 aaPredicted RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 CD79AP11912 226 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 IRF2P14316 349 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 ARSBP15848 533 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 CMPK1P30085 196 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 MRPS6P82932 125 aaKnown RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 CDK6Q00534 326 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 PSG4Q00888 419 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 ID2Q02363 134 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 ST3GAL1Q11201 340 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 OR5I1Q13606 314 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 VGLL4Q14135 290 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 GINS1Q14691 196 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 GNMTQ14749 295 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 EBPQ15125 230 aaKnown RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 HLA-DRB5Q30154 266 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 FAM153CQ494X1 144 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 OTPQ5XKR4 325 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 CHMP1BQ7LBR1 199 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 ANKRD33Q7Z3H0 272 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 NAA40Q86UY6 237 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 H1FOOQ8IZA3 346 aaPredicted RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 RNF149Q8NC42 400 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 OR5M9Q8NGP3 310 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 SSMEM1Q8WWF3 244 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 BADQ92934 168 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 UBE2E3Q969T4 207 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 HIST1H2BAQ96A08 127 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 TMEM159Q96B96 161 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 GFM1Q96RP9 751 aaKnown RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 S1PR3Q99500 378 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 HSPB9Q9BQS6 159 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 LXNQ9BS40 222 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 LINC00470Q9BZP3 86 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 NKX6-2Q9C056 277 aaPredicted RBP4.62□□□□□ -1.67
VPS41-209ENST00000457055 RNF122Q9H9V4 155 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 ACP6Q9NPH0 428 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 SAR1AQ9NR31 198 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 FAM49BQ9NUQ9 324 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 MED29Q9NX70 200 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 RAB22AQ9UL26 194 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 TRAPPC4Q9Y296 219 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 ETV7Q9Y603 341 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 LRRC37A2A6NM11 1700 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 DCHS1Q96JQ0 3298 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 RLFQ13129 1914 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 XIRP2A4UGR9 3374 aa4.62□□□□□ -1.67
VPS41-209ENST00000457055 C5orf42Q9H799 3197 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 BRWD1Q9NSI6 2320 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 MAST2Q6P0Q8 1798 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 CCDC195A0A1B0GUA6 201 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 DAPL1A0PJW8 107 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TSPAN11A1L157 253 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TMEM189A5PLL7 270 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 LILRA5A6NI73 299 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 A8MXK9 166 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 E5RGE8 158 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 NPIPB9F8W1W9 429 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZNF195O14628 629 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 CCL25O15444 150 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 SYNGR1O43759 233 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 FAM189A1O60320 539 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 SNX3O60493 162 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 MMP23AO75900 390 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 HLA-DQA2P01906 255 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 APOA2P02652 100 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 HSD17B1P14061 328 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 USF1P22415 310 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 HRH2P25021 359 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 RPL4P36578 427 aaKnown RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 KIR2DS4P43632 304 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 NKX2-1P43699 371 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 SGSHP51688 502 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 CLDN15P56746 228 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TAS2R30P59541 319 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 RPL8P62917 257 aaKnown RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 HIST1H3AP68431 136 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 H3F3AP84243 136 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TGFBR3Q03167 851 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 CD164Q04900 197 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZNF763Q0D2J5 394 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 FABP9Q0Z7S8 132 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 PPP1R1AQ13522 171 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ATXN7L3Q14CW9 347 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 FAM74A3Q4VXF1 159 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ATP6AP1LQ52LC2 224 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TRMT12Q53H54 448 aaKnown RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 LDLRAD2Q5SZI1 272 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 FAM162BQ5T6X4 162 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZFAND6Q6FIF0 208 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ANKRD54Q6NXT1 300 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 WDR59Q6PJI9 974 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TBPL2Q6SJ96 375 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 OPN5Q6U736 354 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 RASSF6Q6ZTQ3 369 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 HIST2H3AQ71DI3 136 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 STRADAQ7RTN6 431 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms