RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HCKP08631 526 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 POU3F4P49335 361 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 GUCA2AQ02747 115 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 PARP16Q8N5Y8 322 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 OR13C9Q8NGT0 318 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 OR10AC1Q8NH08 325 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 GGHQ92820 318 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 EMG1Q92979 244 aaKnown RBP19.12■□□□□ 0.65
CBX3-204ENST00000456948 LHX4Q969G2 390 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 TBX15Q96SF7 602 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 MTCH1Q9NZJ7 389 aa19.12■□□□□ 0.65
CBX3-204ENST00000456948 NKX1-2Q9UD57 310 aaPredicted RBP19.12■□□□□ 0.65
CBX3-204ENST00000456948 IGKV1-27A0A075B6S5 117 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 IGKV1-9A0A0C4DH69 117 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 M0R1W7 72 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 FCN3O75636 299 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 GNAO1P09471 354 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 SELLP14151 372 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 EEF1B2P24534 225 aaKnown RBP19.11■□□□□ 0.65
CBX3-204ENST00000456948 ACTG1P63261 375 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 PDZK1IP1Q13113 114 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 CDK5R1Q15078 307 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 OR2G6Q5TZ20 316 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 BCL6BQ8N143 479 aaPredicted RBP19.11■□□□□ 0.65
CBX3-204ENST00000456948 FGFRL1Q8N441 504 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 CD177Q8N6Q3 437 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 BPIFB6Q8NFQ5 453 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 OR5D13Q8NGL4 314 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 RHOFQ9HBH0 211 aa19.11■□□□□ 0.65
CBX3-204ENST00000456948 IGHV1-69DA0A0B4J2H0 117 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 CENPVL3A0A0U1RRI6 287 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 SULT1B1O43704 296 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 INMTO95050 263 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 IGHV1-69P01742 117 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 RAB3AP20336 220 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 GTF2A1P52655 376 aaPredicted RBP19.1■□□□□ 0.65
CBX3-204ENST00000456948 TAS2R43P59537 309 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 RPL31P62899 125 aaKnown RBP19.1■□□□□ 0.65
CBX3-204ENST00000456948 NCR3LG1Q68D85 454 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 BRD3OSQ6XYD6 125 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 VMO1Q7Z5L0 202 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 FAM185AQ8N0U4 392 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 FAM58AQ8N1B3 248 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 BATF2Q8N1L9 274 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 ZSCAN4Q8NAM6 433 aaPredicted RBP19.1■□□□□ 0.65
CBX3-204ENST00000456948 PPP1R35Q8TAP8 253 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 SLC25A28Q96A46 364 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 METTL8Q9H825 291 aaKnown RBP19.1■□□□□ 0.65
CBX3-204ENST00000456948 NOX4Q9NPH5 578 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 SCN3BQ9NY72 215 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 ZNF281Q9Y2X9 895 aa19.1■□□□□ 0.65
CBX3-204ENST00000456948 MYL12BO14950 172 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 OGG1O15527 345 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 TFF1P04155 84 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 TK1P04183 234 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 PRTN3P24158 256 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 METAP1DQ6UB28 335 aaPredicted RBP19.09■□□□□ 0.65
CBX3-204ENST00000456948 ASCC1Q8N9N2 400 aaKnown RBP19.09■□□□□ 0.65
CBX3-204ENST00000456948 GCDHQ92947 438 aaPredicted RBP19.09■□□□□ 0.65
CBX3-204ENST00000456948 SMIM19Q96E16 107 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 SEBOXQ9HB31 216 aaPredicted RBP19.09■□□□□ 0.65
CBX3-204ENST00000456948 PSORS1C1Q9UIG5 152 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 ERGIC3Q9Y282 383 aa19.09■□□□□ 0.65
CBX3-204ENST00000456948 UBA52P62987 128 aaKnown RBP19.08■□□□□ 0.64
CBX3-204ENST00000456948 PPP3R1P63098 170 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 SPIN3Q5JUX0 258 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 AHSA2Q719I0 299 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 GDPD3Q7L5L3 318 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 SAXO1Q8IYX7 474 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 ZDHHC22Q8N966 263 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 FBLIM1Q8WUP2 373 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 CLEC2DQ9UHP7 191 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 FAM96BQ9Y3D0 163 aa19.08■□□□□ 0.64
CBX3-204ENST00000456948 K7N7A8 449 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 XPNPEP2O43895 674 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 TMEM225BP0DP42 221 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 SOX2P48431 317 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 BMXP51813 675 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 COL10A1Q03692 680 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 KISS1Q15726 138 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 TUSC1Q2TAM9 212 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.07■□□□□ 0.64
CBX3-204ENST00000456948 MYDGFQ969H8 173 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 SNX22Q96L94 193 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 GPER1Q99527 375 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 CKLFQ9UBR5 152 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 STAB1Q9NY15 2570 aa19.07■□□□□ 0.64
CBX3-204ENST00000456948 CLDN34H7C241 214 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 SH2D1BO14796 132 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 SPRY1O43609 319 aaPredicted RBP19.06■□□□□ 0.64
CBX3-204ENST00000456948 PRKACAP17612 351 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 BCL3P20749 454 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 HSPA13P48723 471 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 CEBPDP49716 269 aaPredicted RBP19.06■□□□□ 0.64
CBX3-204ENST00000456948 YIF1BQ5BJH7 314 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 GHSRQ92847 366 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 TMEM106AQ96A25 262 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 RFT1Q96AA3 541 aa19.06■□□□□ 0.64
CBX3-204ENST00000456948 ELL3Q9HB65 397 aaPredicted RBP19.06■□□□□ 0.64
CBX3-204ENST00000456948 SIRT7Q9NRC8 400 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms