RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 NCBP2LA6PVI3 153 aaKnown RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 C12orf77C9JDV5 145 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 CCRL2O00421 344 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PHYHO14832 338 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 TGOLN2O43493 480 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 DCTN3O75935 186 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 GLSO94925 669 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 LYPLA2O95372 231 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 ATP6V1G2O95670 118 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 AIFM1O95831 613 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PTHP01270 115 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 TNNC2P02585 160 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 THY1P04216 161 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 MRPL3P09001 348 aaKnown RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PGA5P0DJD9 388 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 TCP1P17987 556 aaKnown RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 GABRG2P18507 467 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 DTYMKP23919 212 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 TUFMP49411 452 aaKnown RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR12D2P58182 307 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 VSX2P58304 361 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 RAP1BP61224 184 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PPP1CBP62140 327 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 LSM6P62312 80 aaKnown RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 CD47Q08722 323 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PRR4Q16378 134 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 SPIN3Q5JUX0 258 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 SYT6Q5T7P8 510 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 ANKRD22Q5VYY1 191 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 C12orf54Q6X4T0 127 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 RTL4Q6ZR62 310 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 MRPL55Q7Z7F7 128 aaKnown RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 NT5DC3Q86UY8 548 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 CDC20BQ86Y33 519 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 TRAPPC5Q8IUR0 188 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 FBXO16Q8IX29 292 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 FAM71AQ8IYT1 594 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 ZFP82Q8N141 532 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 KLHL30-AS1Q8NEE0 82 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR10W1Q8NGF6 305 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR51S1Q8NGJ8 323 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR51G1Q8NGK1 321 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 TEX47Q8TBZ9 253 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR51E1Q8TCB6 317 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 CHCHD10Q8WYQ3 142 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 RAD51AP1Q96B01 352 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 RBP7Q96R05 134 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR5M11Q96RB7 305 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 GPR22Q99680 433 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 SULT4A1Q9BR01 284 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PAXXQ9BUH6 204 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 C19orf24Q9BVV8 132 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 UGT2B28Q9BY64 529 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 COA1Q9GZY4 146 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR51B5Q9H339 312 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 RNF167Q9H6Y7 350 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 RHOFQ9HBH0 211 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 PLGRKTQ9HBL7 147 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 MED4Q9NPJ6 270 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 MIEF1Q9NQG6 463 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 COMMD9Q9P000 198 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 XCL2Q9UBD3 114 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 VSIG4Q9Y279 399 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 LRRC37AA6NMS7 1700 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 DENND4AQ7Z401 1863 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 SCN9AQ15858 1988 aa2.81□□□□□ -1.96
HMGB1P15-201ENST00000453854 NUP98P52948 1817 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 COL2A1P02458 1487 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 EDC4Q6P2E9 1401 aaKnown RBP2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 IGHV1OR15-1A0A075B7D0 117 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 IGHV7-81A0A0B4J1V7 117 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 FAM240AA0A1B0GVK7 77 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 C21orf140B9A014 251 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 CXCR6O00574 342 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 GABRPO00591 440 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 AGPAT2O15120 278 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 CTNSO60931 367 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 SLC22A5O76082 557 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 SNAPINO95295 136 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 KRT75O95678 551 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 C6orf47O95873 294 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 PTTG1O95997 202 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 TCRBP04435 133 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 OR4E1P0C645 316 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 SLC35G6P0C7Q6 338 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 CCDC166P0CW27 439 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 PGA4P0DJD7 388 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 PGA3P0DJD8 388 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 GGT1P19440 569 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 FUT3P21217 361 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 VDAC1P21796 283 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 WARSP23381 471 aaKnown RBP2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 MDH2P40926 338 aaKnown RBP2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 GNG10P50151 68 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 RAB7AP51149 207 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 AQP5P55064 265 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 NUTF2P61970 127 aaKnown RBP2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 SLC35A1P78382 337 aa2.8□□□□□ -1.96
HMGB1P15-201ENST00000453854 SRSF6Q13247 344 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms