RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 DLX6P56179 175 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 ACTA2P62736 377 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 ACTG2P63267 376 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 ZNF91Q05481 1191 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 GALEQ14376 348 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 SLC25A26Q70HW3 274 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 MKXQ8IYA7 352 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 Q8IYB0 196 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 BATF2Q8N1L9 274 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 PQLC1Q8N2U9 271 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 OR5R1Q8NH85 324 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 Q96MT0 163 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 ZNF649Q9BS31 505 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 HEXA-AS1Q9H8Q6 139 aa15.81■□□□□ 0.12
USP40-207ENST00000450940 PAHP00439 452 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 IGHA1P01876 353 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 HTR1AP08908 422 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 DBTP11182 482 aaKnown RBP15.8■□□□□ 0.12
USP40-207ENST00000450940 ATF1P18846 271 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 PRKACBP22694 351 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 ATP1B3P54709 279 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 COL10A1Q03692 680 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 ZBTB49Q6ZSB9 765 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 SYS1Q8N2H4 156 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 OR4M1Q8NGD0 313 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 LINC01006Q8NI28 216 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 SLAMF9Q96A28 289 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 FGGYQ96C11 551 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 MRPL48Q96GC5 212 aaKnown RBP15.8■□□□□ 0.12
USP40-207ENST00000450940 C4orf36Q96KX1 117 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 MYCBPQ99417 103 aaPredicted RBP15.8■□□□□ 0.12
USP40-207ENST00000450940 MEGF9Q9H1U4 602 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 C16orf95Q9H693 158 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 MRPS18AQ9NVS2 196 aaKnown RBP15.8■□□□□ 0.12
USP40-207ENST00000450940 FAM118AQ9NWS6 357 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 HHLA2Q9UM44 414 aa15.8■□□□□ 0.12
USP40-207ENST00000450940 LOC100130705A0A1B0GUX0 176 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 hCG_1809904A0A1W2PP81 198 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 A0A1W2PPE2 198 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 A0A1W2PR64 198 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 A0A1W2PRV1 198 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 BTBD17A6NE02 478 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 C17orf98A8MV24 154 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 J3QLW9 94 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 ANGPTL7O43827 346 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 MT-ND2P03891 347 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 CCL3L1P16619 93 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 ZNF19P17023 458 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 ALKBH1Q13686 389 aaKnown RBP15.79■□□□□ 0.12
USP40-207ENST00000450940 ZNF273Q14593 569 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 AANATQ16613 207 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 OR10AC1Q8NH08 325 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 C17orf50Q8WW18 174 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 SPSB1Q96BD6 273 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 SNX22Q96L94 193 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 CITED1Q99966 193 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 INPP5EQ9NRR6 644 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 MYRFQ9Y2G1 1151 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 MEGF8Q7Z7M0 2845 aa15.79■□□□□ 0.12
USP40-207ENST00000450940 TRBV2A0A0J9YWF9 115 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 TSPAN9O75954 239 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 CLPXO76031 633 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 FADS2O95864 444 aaKnown RBP15.78■□□□□ 0.12
USP40-207ENST00000450940 RBP4P02753 201 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 AZGP1P25311 298 aaKnown RBP15.78■□□□□ 0.12
USP40-207ENST00000450940 MTCP1P56278 107 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 PROK1P58294 105 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 RAB40BQ12829 278 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 Q6ZSV7 163 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 LHFPL2Q6ZUX7 228 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 LHFPL3Q86UP9 236 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 OR8H2Q8N162 312 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 ASCC1Q8N9N2 400 aaKnown RBP15.78■□□□□ 0.12
USP40-207ENST00000450940 OR51A4Q8NGJ6 313 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 ALG8Q9BVK2 526 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 ERVK13-1Q9NX77 482 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 RNF114Q9Y508 228 aa15.78■□□□□ 0.12
USP40-207ENST00000450940 TMEM82A0PJX8 343 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 RPSAP08865 295 aaKnown RBP15.77■□□□□ 0.12
USP40-207ENST00000450940 ZNF20P17024 532 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 TGFBR2P37173 567 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 NPBWR2P48146 333 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 ERVFRD-1P60508 538 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 MEF2CQ06413 473 aaPredicted RBP15.77■□□□□ 0.12
USP40-207ENST00000450940 SRSF4Q08170 494 aaKnown RBP15.77■□□□□ 0.12
USP40-207ENST00000450940 PDZK1IP1Q13113 114 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 ZNF146Q15072 292 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 C17orf107Q6ZR85 190 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 FAM58AQ8N1B3 248 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 EMG1Q92979 244 aaKnown RBP15.77■□□□□ 0.12
USP40-207ENST00000450940 RDH12Q96NR8 316 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 OPALINQ96PE5 141 aa15.77■□□□□ 0.12
USP40-207ENST00000450940 ISG20L2Q9H9L3 353 aaKnown RBP15.77■□□□□ 0.12
USP40-207ENST00000450940 VWFP04275 2813 aa15.76■□□□□ 0.11
USP40-207ENST00000450940 FAM90A8PA6NJQ4 464 aa15.76■□□□□ 0.11
USP40-207ENST00000450940 ALX3O95076 343 aa15.76■□□□□ 0.11
USP40-207ENST00000450940 HAND1O96004 215 aa15.76■□□□□ 0.11
USP40-207ENST00000450940 CYB5AP00167 134 aa15.76■□□□□ 0.11
USP40-207ENST00000450940 ZNF728P0DKX0 622 aa15.76■□□□□ 0.11
USP40-207ENST00000450940 KRTAP10-3P60369 221 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms