RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 LDLRAD3Q86YD5 345 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 GID4Q8IVV7 300 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 MRPL48Q96GC5 212 aaKnown RBP8.47□□□□□ -1.05
CCDC171-203ENST00000449575 TBX5Q99593 518 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 ABHD6Q9BV23 337 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 BCL2L14Q9BZR8 327 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM218A2RU14 115 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 PLPP2O43688 288 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 GATBO75879 557 aaKnown RBP8.47□□□□□ -1.05
CCDC171-203ENST00000449575 CRYAAP02489 173 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 OR10A3P58181 314 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 PCBD1P61457 104 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 EIF2B1Q14232 305 aaKnown RBP8.47□□□□□ -1.05
CCDC171-203ENST00000449575 GGTLC2Q14390 218 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 RNF212Q495C1 297 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 PUSL1Q8N0Z8 303 aaKnown RBP8.47□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM185AQ8NFB2 350 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 GJC3Q8NFK1 279 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 OR2AJ1Q8NGZ0 328 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 OTOSQ8NHW6 89 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 ABHD4Q8TB40 342 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 THAP6Q8TBB0 222 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 FCAMRQ8WWV6 532 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 SLAMF6Q96DU3 332 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 BARX1Q9HBU1 254 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-203ENST00000449575 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 CENPMQ9NSP4 180 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 FZR1Q9UM11 496 aa8.47□□□□□ -1.05
CCDC171-203ENST00000449575 AKAP9Q99996 3911 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 MT-ND5P03915 603 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 SBK2P0C263 348 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 PRSS12P56730 875 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 PLP2Q04941 152 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 GUCA2BQ16661 112 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 TMEM255AQ5JRV8 349 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 TEX30Q5JUR7 227 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 SERPINA12Q8IW75 414 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 OR1F12Q8NHA8 337 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 GINS4Q9BRT9 223 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 ALG8Q9BVK2 526 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 POFUT1Q9H488 388 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 UBTD1Q9HAC8 227 aa8.46□□□□□ -1.05
CCDC171-203ENST00000449575 NAV2Q8IVL1 2488 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 ARL6IP5O75915 188 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 NDUFB6O95139 128 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 FOLR2P14207 255 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 ALOX5APP20292 161 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 APLNRP35414 380 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 FAUP35544 74 aaKnown RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 KCNJ3P48549 501 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 ART1P52961 327 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 NKX6-1P78426 367 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 SMCO1Q147U7 214 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 RAB35Q15286 201 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF672Q499Z4 452 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 SPATA46Q5T0L3 261 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 SLC16A9Q7RTY1 509 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 DPPA2Q7Z7J5 298 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 STX12Q86Y82 276 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 CNN2Q99439 309 aaKnown RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 CMSS1Q9BQ75 279 aaKnown RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 TINAGL1Q9GZM7 467 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 C1orf198Q9H425 327 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 CISD1Q9NZ45 108 aaKnown RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 CARHSP1Q9Y2V2 147 aaKnown RBP8.46□□□□□ -1.06
CCDC171-203ENST00000449575 ATP23Q9Y6H3 246 aa8.46□□□□□ -1.06
CCDC171-203ENST00000449575 KANTRA0A1W2PQU2 76 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 RFPL4AA6NLU0 287 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 F5H5K5 113 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 RFPL4AL1F8VTS6 287 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 GPR31O00270 319 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 CRYBA1P05813 215 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 SLC2A1P11166 492 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 THBS4P35443 961 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 PRKXP51817 358 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 TBC1D28Q2M2D7 210 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 TMEM88Q6PEY1 159 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 ARL9Q6T311 187 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 LRP11Q86VZ4 500 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 DNAAF1Q8NEP3 725 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF671Q8TAW3 534 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 AUNIPQ9H7T9 357 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 HAO2Q9NYQ3 351 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 DAPL1A0PJW8 107 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 ANKRD20A5PA0PJZ0 165 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 J3QRE1 110 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 SOD3P08294 240 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 SNRPBP14678 240 aaKnown RBP8.45□□□□□ -1.06
CCDC171-203ENST00000449575 ECH1Q13011 328 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 C10orf91Q5T1B1 145 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 SSX8Q7RTT4 187 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 PRSS45Q7RTY3 260 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 CDH20Q9HBT6 801 aa8.45□□□□□ -1.06
CCDC171-203ENST00000449575 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-203ENST00000449575 MYO9AB2RTY4 2548 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms