RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 EXTL2Q9UBQ6 330 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
TNF-208ENST00000449264 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
TNF-208ENST00000449264 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 ZNF205O95201 554 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 GABRR1P24046 479 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 TNFSF8P32971 234 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 CD80P33681 288 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 FGF12P61328 243 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 RPS27AP62979 156 aaKnown RBP12.32□□□□□ -0.44
TNF-208ENST00000449264 FAM201AQ5SY85 155 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 BIVMQ86UB2 503 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 GCSAMQ8N6F7 178 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 OR10Z1Q8NGY1 313 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 Q8TCH9 128 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 HPS1Q92902 700 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 PTX4Q96A99 478 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 PHF21AQ96BD5 680 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 WDFY2Q96P53 400 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
TNF-208ENST00000449264 LPAR5Q9H1C0 372 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 ST3GAL6Q9Y274 331 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 METTL21EPA6NDL7 271 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 SRRM5B3KS81 715 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
TNF-208ENST00000449264 NDUFS7O75251 213 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 DUSP1P28562 367 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 TALDO1P37837 337 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 VEGFCP49767 419 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 RBM11P57052 281 aaKnown RBP12.32□□□□□ -0.44
TNF-208ENST00000449264 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 PDCD1Q15116 288 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 TAF9Q16594 264 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 SMIM21Q3B7S5 101 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 ELP2Q6IA86 826 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 CDH24Q86UP0 819 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 OR4M1Q8NGD0 313 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 NEU4Q8WWR8 484 aaPredicted RBP12.32□□□□□ -0.44
TNF-208ENST00000449264 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 S100A16Q96FQ6 103 aaKnown RBP12.32□□□□□ -0.44
TNF-208ENST00000449264 Q96M66 194 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 TSC22D3Q99576 134 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 ABCG5Q9H222 651 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 HMG20AQ9NP66 347 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 DNAJB11Q9UBS4 358 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 NPTNQ9Y639 398 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 ARID1AO14497 2285 aa12.32□□□□□ -0.44
TNF-208ENST00000449264 IGHV3OR15-7A0A075B7D8 119 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 NOS1APO75052 506 aaPredicted RBP12.31□□□□□ -0.44
TNF-208ENST00000449264 CPT2P23786 658 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 CDK2P24941 298 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 KRTAP10-9P60411 292 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 HFEQ30201 348 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 MOGAT2Q3SYC2 334 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 SPANXN2Q5MJ10 180 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 TMEM69Q5SWH9 247 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 SFRP4Q6FHJ7 346 aaPredicted RBP12.31□□□□□ -0.44
TNF-208ENST00000449264 FIP1L1Q6UN15 594 aaKnown RBP12.31□□□□□ -0.44
TNF-208ENST00000449264 ACP7Q6ZNF0 438 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 MRPS24Q96EL2 167 aaKnown RBP12.31□□□□□ -0.44
TNF-208ENST00000449264 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 CXorf56Q9H5V9 222 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 HES4Q9HCC6 221 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
TNF-208ENST00000449264 OVOL3O00110 214 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 OR7C1O76099 320 aaPredicted RBP12.3□□□□□ -0.44
TNF-208ENST00000449264 ACAA1P09110 424 aaPredicted RBP12.3□□□□□ -0.44
TNF-208ENST00000449264 DAOP14920 347 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 COL8A2P25067 703 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 PITPNBP48739 271 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 SCN1BQ07699 218 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 IKZF1Q13422 519 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 NKAPLQ5M9Q1 402 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 C1orf87Q8N0U7 546 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 Q8NFD4 153 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 YIPF5Q969M3 257 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 TM2D1Q9BX74 207 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 RHOFQ9HBH0 211 aa12.3□□□□□ -0.44
TNF-208ENST00000449264 TMEM178BH3BS89 294 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.29□□□□□ -0.44
TNF-208ENST00000449264 SOCS1O15524 211 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 LHBP01229 141 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CFHR2P36980 270 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
TNF-208ENST00000449264 LSAMPQ13449 338 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 IL18Q14116 193 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CARTPTQ16568 116 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 ZNF181Q2M3W8 571 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 FAM131AQ6UXB0 335 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CCDC190Q86UF4 302 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 RTN4RL2Q86UN3 420 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CHST4Q8NCG5 386 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms