RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 GCSAMQ8N6F7 178 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 BOLLQ8N9W6 283 aaKnown RBP16.46■□□□□ 0.23
SGCE-207ENST00000447873 CCL17Q92583 94 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 CCL19Q99731 98 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 NICN1Q9BSH3 213 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 HMG20AQ9NP66 347 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 EXTL2Q9UBQ6 330 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 TANC2Q9HCD6 1990 aa16.46■□□□□ 0.23
SGCE-207ENST00000447873 CELSR2Q9HCU4 2923 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 SRRM5B3KS81 715 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 C3orf80F5H4A9 247 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 RBMXP38159 391 aaKnown RBP16.45■□□□□ 0.22
SGCE-207ENST00000447873 PITPNBP48739 271 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 SNU13P55769 128 aaKnown RBP16.45■□□□□ 0.22
SGCE-207ENST00000447873 PIGYQ3MUY2 71 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 FIP1L1Q6UN15 594 aaKnown RBP16.45■□□□□ 0.22
SGCE-207ENST00000447873 BIVMQ86UB2 503 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 DTX3Q8N9I9 347 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 OR4M1Q8NGD0 313 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 Q96M66 194 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 TM2D1Q9BX74 207 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 WDR13Q9H1Z4 485 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 HES4Q9HCC6 221 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 DIABLOQ9NR28 239 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 RASL12Q9NYN1 266 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 NPTNQ9Y639 398 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 CACNG2Q9Y698 323 aa16.45■□□□□ 0.22
SGCE-207ENST00000447873 OVOL3O00110 214 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 WNT9BO14905 357 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 CYB5R3P00387 301 aaPredicted RBP16.44■□□□□ 0.22
SGCE-207ENST00000447873 LHBP01229 141 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 GABRR1P24046 479 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 VEGFCP49767 419 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 RBM11P57052 281 aaKnown RBP16.44■□□□□ 0.22
SGCE-207ENST00000447873 HOXA4Q00056 320 aaPredicted RBP16.44■□□□□ 0.22
SGCE-207ENST00000447873 TAF9Q16594 264 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 ZNF181Q2M3W8 571 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 HFEQ30201 348 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 SMIM21Q3B7S5 101 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 METAP1DQ6UB28 335 aaPredicted RBP16.44■□□□□ 0.22
SGCE-207ENST00000447873 CCDC190Q86UF4 302 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 TGIF2LYQ8IUE0 185 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 C1orf87Q8N0U7 546 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 CXorf56Q9H5V9 222 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 IL36RNQ9UBH0 155 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 PTPN13Q12923 2485 aa16.44■□□□□ 0.22
SGCE-207ENST00000447873 FABP12A6NFH5 140 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 IFNL4K9M1U5 179 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 GEMIN2O14893 280 aaKnown RBP16.43■□□□□ 0.22
SGCE-207ENST00000447873 SCGNO76038 276 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 CHRM2P08172 466 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 EGR1P18146 543 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 CDK2P24941 298 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 MADCAM1Q13477 382 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 NHLRC3Q5JS37 347 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 TMEM69Q5SWH9 247 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 ZNF787Q6DD87 383 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 RAB12Q6IQ22 244 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 ACP7Q6ZNF0 438 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 FAM89BQ8N5H3 189 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 OR56B1Q8NGI3 324 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 IGFBPL1Q8WX77 278 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 TMEM106BQ9NUM4 274 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 USF3Q68DE3 2245 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 A0A0A6YYD4 124 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 A0A0A6YYH2 397 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 A6NJ64 397 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 XRCC3O43542 346 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 DUSP1P28562 367 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 MOGAT2Q3SYC2 334 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 FAM131AQ6UXB0 335 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 IZUMO1Q8IYV9 350 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 S100ZQ8WXG8 99 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 POM121Q96HA1 1249 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 DLL4Q9NR61 685 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 DCAF16Q9NXF7 216 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 DNAJB11Q9UBS4 358 aa16.43■□□□□ 0.22
SGCE-207ENST00000447873 TMEM178BH3BS89 294 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 RAB27BO00194 218 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 SOCS1O15524 211 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 LY6HO94772 140 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 COL8A2P25067 703 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 ETV6P41212 452 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 MRPS11P82912 194 aaKnown RBP16.42■□□□□ 0.22
SGCE-207ENST00000447873 SPIN3Q5JUX0 258 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 HIST2H2BCQ6DN03 193 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 LINC00596Q86U02 117 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 CHST4Q8NCG5 386 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 OR10R2Q8NGX6 335 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 RDH5Q92781 318 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 SEH1LQ96EE3 360 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 LIME1Q9H400 295 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 AKIP1Q9NQ31 210 aa16.42■□□□□ 0.22
SGCE-207ENST00000447873 MRPS7Q9Y2R9 242 aaKnown RBP16.42■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A10PA6NDY2 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A18PA6NE21 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A16PA6NEW6 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A20PA6NIJ5 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A8PA6NJQ4 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A7PA6NKC0 464 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms