RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
CCNE1-203ENST00000444983 CMTM3Q96MX0 182 aa12.69□□□□□ -0.38
CCNE1-203ENST00000444983 MMP27Q9H306 513 aa12.69□□□□□ -0.38
CCNE1-203ENST00000444983 NPTNQ9Y639 398 aa12.69□□□□□ -0.38
CCNE1-203ENST00000444983 CSMD1Q96PZ7 3565 aa12.69□□□□□ -0.38
CCNE1-203ENST00000444983 CTDSP2O14595 271 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 HTR3BO95264 441 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 GTF2F2P13984 249 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 MGMTP16455 207 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 RAB6AP20340 208 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 GLRA1P23415 457 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 PTH2RP49190 550 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 BMXP51813 675 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 TEX36Q5VZQ5 186 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A1Q86YD7 464 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 BATF2Q8N1L9 274 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 FAM89BQ8N5H3 189 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 MCFD2Q8NI22 146 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 SEH1LQ96EE3 360 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 ELL3Q9HB65 397 aaPredicted RBP12.68□□□□□ -0.38
CCNE1-203ENST00000444983 PCDHB16Q9NRJ7 776 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 PTTG2Q9NZH5 202 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 IL36RNQ9UBH0 155 aa12.68□□□□□ -0.38
CCNE1-203ENST00000444983 CRTAPO75718 401 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 CSTBP04080 98 aaKnown RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 RPS27AP62979 156 aaKnown RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 ZNF146Q15072 292 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 FAM201AQ5SY85 155 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 DNM1P46Q6ZS02 220 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 NINJ1Q92982 152 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 MBD6Q96DN6 1003 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 LURAP1Q96LR2 239 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 Q96M66 194 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 ABCG5Q9H222 651 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 BANF2Q9H503 90 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 CHODLQ9H9P2 273 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 RAB22AQ9UL26 194 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 TNFRSF13BO14836 293 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 NXPH2O95156 264 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 IRF2P14316 349 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 RBM11P57052 281 aaKnown RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 TMEM33P57088 247 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 PIGYQ3MUY2 71 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 SAMD12Q8N8I0 201 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 EMG1Q92979 244 aaKnown RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 TMEM59Q9BXS4 323 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 MYOZ1Q9NP98 299 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 BEX4Q9NWD9 120 aaPredicted RBP12.67□□□□□ -0.38
CCNE1-203ENST00000444983 ST3GAL6Q9Y274 331 aa12.67□□□□□ -0.38
CCNE1-203ENST00000444983 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 CLPXO76031 633 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 MPIG6BO95866 241 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 MUC1P15941 1255 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-203ENST00000444983 PRKACAP17612 351 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 ATP5J2P56134 94 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 SMIM21Q3B7S5 101 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 SPIN3Q5JUX0 258 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 SFRP4Q6FHJ7 346 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-203ENST00000444983 MZT2AQ6P582 158 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 LRRC75A-AS1Q8N1F1 130 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 NICN1Q9BSH3 213 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 SELENOIQ9C0D9 397 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 BARX1Q9HBU1 254 aaPredicted RBP12.66□□□□□ -0.38
CCNE1-203ENST00000444983 RHBDL2Q9NX52 303 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 NLKQ9UBE8 527 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 ZNF222Q9UK12 451 aa12.66□□□□□ -0.38
CCNE1-203ENST00000444983 FLNBO75369 2602 aaKnown RBP12.65□□□□□ -0.38
CCNE1-203ENST00000444983 VPS13CQ709C8 3753 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 PPIAL4EA0A075B759 164 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A10PA6NDY2 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 OOEPA6NGQ2 149 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A8PA6NJQ4 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A7PA6NKC0 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A22PA8MWA6 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 FAM90A23PA8MXZ1 464 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 PPIAL4DF5H284 164 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 RAB27BO00194 218 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 GEMIN2O14893 280 aaKnown RBP12.65□□□□□ -0.38
CCNE1-203ENST00000444983 HPGDSO60760 199 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 ZNF205O95201 554 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 KNG1P01042 644 aa12.65□□□□□ -0.38
CCNE1-203ENST00000444983 IGHV2-70P01814 119 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms