RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
SMARCA4-204ENST00000444061 GSX2Q9BZM3 304 aa12.3□□□□□ -0.44
SMARCA4-204ENST00000444061 SLC33A1O00400 549 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 SSTR2P30874 369 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 DCTDP32321 178 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 SERPINF1P36955 418 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 OR3A4PP47883 348 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 ZNF2Q9BSG1 426 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 RAB19A4D1S5 217 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 OR5H8P0DN80 308 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 PNLIPRP3Q17RR3 467 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 DTX1Q86Y01 620 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 OR5B12Q96R08 314 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 METTL17Q9H7H0 456 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 TMEM210A6NLX4 147 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 RAB5CP51148 216 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 HMGN3Q15651 99 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 MOB1BQ7L9L4 216 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 PURGQ9UJV8 347 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 IFNA4P05014 189 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 INSL4Q14641 139 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 KHDC1LQ5JSQ8 128 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 MYO7BQ6PIF6 2116 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 SEH1LQ96EE3 360 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 RBM38Q9H0Z9 239 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 SLC17A5Q9NRA2 495 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 OR5V1Q9UGF6 321 aa12.29□□□□□ -0.44
SMARCA4-204ENST00000444061 PDCD6O75340 191 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 COX5BP10606 129 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 ZNF616Q08AN1 781 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 GABRA6Q16445 453 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 MDS2Q8NDY4 140 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 RFESDQ8TAC1 157 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 RTN4RQ9BZR6 473 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 KLHDC2Q9Y2U9 406 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 ROS1P08922 2347 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 ESPL1Q14674 2120 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 FCGR2CP31995 323 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 RPS4XP62701 263 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 RNLSQ5VYX0 342 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 MEX3AA1L020 520 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 IGHMP01871 453 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 THY1P04216 161 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 TCRBP04435 133 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 PEA15Q15121 130 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 FCN2Q15485 313 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 TEX30Q5JUR7 227 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 OR51S1Q8NGJ8 323 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 ADAMTS17Q8TE56 1095 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 RNASE6Q93091 150 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 MSI2Q96DH6 328 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 CHST6Q9GZX3 395 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 CNTD2Q9H8S5 307 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 SPRR3Q9UBC9 169 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 NUPL2O15504 423 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 EIF4EP06730 217 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 HOXA1P49639 335 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 SLC51BQ86UW2 128 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 LHFPL6Q9Y693 200 aa12.28□□□□□ -0.44
SMARCA4-204ENST00000444061 HELZP42694 1942 aaKnown RBP12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 SSX1Q16384 188 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 PRAMEF6Q5VXH4 476 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 LGI3Q8N145 548 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 UBALD1Q8TB05 177 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 DCUN1D4Q92564 292 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 OR6C3Q9NZP0 311 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 CLN8Q9UBY8 286 aa12.27□□□□□ -0.44
SMARCA4-204ENST00000444061 PPIAL4EA0A075B759 164 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 A0A0U1RQV5 110 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 PPIAL4DF5H284 164 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 TSTD3H0UI37 97 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 TTRP02766 147 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 PPIAL4FP0DN26 164 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 RPS16P62249 146 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 DGCR2P98153 550 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 FLI1Q01543 452 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 FNDC7Q5VTL7 733 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 XAF1Q6GPH4 301 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 ZNF546Q86UE3 836 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 C1orf162Q8NEQ5 155 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 OR10AC1Q8NH08 325 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 TUBD1Q9UJT1 453 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 PPIAL4AQ9Y536 164 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 SPTBN1Q01082 2364 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 XRCC3O43542 346 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 PRF1P14222 555 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 MDH2P40926 338 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 EVX1P49640 407 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 TRAT1Q6PIZ9 186 aa12.27□□□□□ -0.45
SMARCA4-204ENST00000444061 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms