RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 UMODP07911 640 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 GPR137CQ8N3F9 429 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 UBAC2Q8NBM4 344 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 RTN4IP1Q8WWV3 396 aaPredicted RBP14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 MR1Q95460 341 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 E5RGE8 158 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 SYNGR3O43761 229 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 AVPI1Q5T686 147 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 FIP1L1Q6UN15 594 aaKnown RBP14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 LHFPL2Q6ZUX7 228 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 GALNT14Q96FL9 552 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 SF3B5Q9BWJ5 86 aaKnown RBP14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 SRXN1Q9BYN0 137 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 NAA60Q9H7X0 242 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 NIT2Q9NQR4 276 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 NSG2Q9Y328 171 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 IGKV1-27A0A075B6S5 117 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 S100A8P05109 93 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 OR5AC1P0C628 307 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 SP6Q3SY56 376 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF774Q6NX45 483 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 DBX2Q6ZNG2 339 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 M1APQ8TC57 530 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 CRLF2Q9HC73 371 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 FSCN3Q9NQT6 498 aa14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 FAM212BQ9NTI7 297 aaPredicted RBP14.35□□□□□ -0.11
SEMA3B-207ENST00000441915 CRYBA1P05813 215 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 CHATP28329 748 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 FXYD4P59646 89 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 RAC3P60763 192 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 PEA15Q15121 130 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 RPS19BP1Q86WX3 136 aaKnown RBP14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 ZFP82Q8N141 532 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 KIRREL1Q96J84 757 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 PLA2G2EQ9NZK7 142 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 HS3ST3B1Q9Y662 390 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF205O95201 554 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 MBPP02686 304 aaPredicted RBP14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 CST2P09228 141 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 ID4P47928 161 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 TMEM187Q14656 261 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 RXFP4Q8TDU9 374 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 CLDN23Q96B33 292 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 SH2D2AQ9NP31 389 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 ZNF581Q9P0T4 197 aa14.34□□□□□ -0.11
SEMA3B-207ENST00000441915 C9J4A7 227 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 GEMIN2O14893 280 aaKnown RBP14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 DNPH1O43598 174 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 NRASP01111 189 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 OR8U9P0C7N5 309 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 PRSS12P56730 875 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 HGFACQ04756 655 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 HLA-BQ31612 363 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 SKA3Q8IX90 412 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 OR10AD1Q8NGE0 317 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 OR8U1Q8NH10 309 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 LYPD6BQ8NI32 183 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 ERGIC1Q969X5 290 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 SUCNR1Q9BXA5 334 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 OR51M1Q9H341 326 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 KLF7O75840 302 aaPredicted RBP14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 SSTP61278 116 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 OSR2Q8N2R0 312 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 NAXEQ8NCW5 288 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 IFI44Q8TCB0 444 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 SYT3Q9BQG1 590 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 SLC2A9Q9NRM0 540 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 LHX6Q9UPM6 363 aa14.33□□□□□ -0.12
SEMA3B-207ENST00000441915 CCDC187A0A096LP49 1063 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 MEX3AA1L020 520 aaKnown RBP14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 TSPAN15O95858 294 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 ZNF32P17041 273 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 PIGYQ3MUY2 71 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 BRICD5Q6PL45 260 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 SLC22A25Q6T423 547 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 ASCL4Q6XD76 172 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 LYZL2Q7Z4W2 148 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 LRTM2Q8N967 370 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 AKR1E2Q96JD6 320 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 BCO1Q9HAY6 547 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 TMEM38BQ9NVV0 291 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 ZNF391Q9UJN7 358 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 NSG1A0A0A6YYJ2 146 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 BORCS7-ASMTA0A0B4J1R7 106 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 FAM157AC9JC47 383 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 C9JQL5 133 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 B4GALT1P15291 398 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 S100PP25815 95 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 HTR5AP47898 357 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 PHLDA2Q53GA4 152 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 TSPO2Q5TGU0 170 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 AKR7LQ8NHP1 331 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 DYRK2Q92630 601 aa14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 MARS2Q96GW9 593 aaKnown RBP14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 ALKBH3Q96Q83 286 aaPredicted RBP14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 PARP12Q9H0J9 701 aaKnown RBP14.32□□□□□ -0.12
SEMA3B-207ENST00000441915 ZNF286AQ9HBT8 521 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms