RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ZNF264O43296 627 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 SSSCA1O60232 199 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 NKX2-2O95096 273 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 SRP19P09132 144 aaKnown RBP6.63□□□□□ -1.35
HDAC9-214ENST00000441542 ADH5P11766 374 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 CHRNA7P36544 502 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 POLR2HP52434 150 aaKnown RBP6.63□□□□□ -1.35
HDAC9-214ENST00000441542 CLDN17P56750 224 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 RTP5Q14D33 572 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 HERPUD1Q15011 391 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 JOSD1Q15040 202 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-214ENST00000441542 C1orf140Q5VVS0 124 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 FAM57BQ71RH2 274 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 Q7L0L9 218 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 C16orf52Q8NHV5 167 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 RSC1A1Q92681 617 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 LIN37Q96GY3 246 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-214ENST00000441542 OR51B6Q9H340 312 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 FUT9Q9Y231 359 aa6.63□□□□□ -1.35
HDAC9-214ENST00000441542 URB1O60287 2271 aaKnown RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 MTCL1Q9Y4B5 1905 aaKnown RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 NSG1A0A0A6YYJ2 146 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 TRAV34A0A0B4J273 112 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 SCDO00767 359 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 AQP7O14520 342 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 DLEU1O43261 78 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 IL18BPO95998 194 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 RPLP2P05387 115 aaKnown RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 ZNF10P21506 573 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 ELLP55199 621 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 RPS15AP62244 130 aaKnown RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 HLA-DRB3P79483 266 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 TESK1Q15569 626 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 PHF19Q5T6S3 580 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 WBP2NLQ6ICG8 309 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 PIGTQ969N2 578 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 RPUSD4Q96CM3 377 aaKnown RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 C5orf34Q96MH7 638 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 LRRC3BQ96PB8 259 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 SCGB3A2Q96PL1 93 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 FGF22Q9HCT0 170 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 PAM16Q9Y3D7 125 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 R4GMQ9 66 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 IGKV1D-43A0A0B4J1Z2 117 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 OTOL1A6NHN0 477 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 CEBPZOSA8MTT3 80 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 PHF1O43189 567 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 EPHA1P21709 976 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 P2RY1P47900 373 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 GLIPR1P48060 266 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 ELAVL3Q14576 367 aaKnown RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 CEBPEQ15744 281 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 ERASQ7Z444 233 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 C1QL2Q7Z5L3 287 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 ZNF440Q8IYI8 595 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 CMTM1Q8IZ96 169 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 OR1P1Q8NH06 330 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 THAP3Q8WTV1 239 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 PARD6GQ9BYG4 376 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-214ENST00000441542 SUSD2Q9UGT4 822 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 CLDN16Q9Y5I7 305 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 SCN10AQ9Y5Y9 1956 aa6.62□□□□□ -1.35
HDAC9-214ENST00000441542 TNRC18O15417 2968 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 A0A1W2PQ45 241 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 A0A1W2PQY0 241 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 E5RGE8 158 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 SIAH2O43255 324 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 GALR2O43603 387 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 NUDT21O43809 227 aaKnown RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 DBHP09172 617 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 SEC11BP0C7V7 166 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 IRF2P14316 349 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 HSD11B1P28845 292 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 IL12BP29460 328 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 GNMTQ14749 295 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 HNRNPA1L2Q32P51 320 aaKnown RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 HIKESHIQ53FT3 197 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 SPIN3Q5JUX0 258 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 LINC00114Q6XXX2 140 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 Q6ZVH6 145 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 CALHM1Q8IU99 346 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 ANKRD9Q96BM1 317 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 VWCEQ96DN2 955 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 DGAT2Q96PD7 388 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 OR2A5Q96R48 311 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 RTN4RQ9BZR6 473 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 ZNF665Q9H7R5 613 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 ZNF581Q9P0T4 197 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 DEC1Q9P2X7 70 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 NSG2Q9Y328 171 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 FAM230AA0A1W2PPH8 454 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 CLDN34H7C241 214 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 CDC14BO60729 498 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 GAPDHP04406 335 aaKnown RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 IGFBP3P17936 291 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-214ENST00000441542 ANOS1P23352 680 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 CDAP32320 146 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 OR3A1P47881 315 aa6.61□□□□□ -1.35
HDAC9-214ENST00000441542 TDGF1P3P51864 188 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms