RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RAB11AP62491 216 aa11.71□□□□□ -0.53
ACTN1-204ENST00000438964 LANCL3Q6ZV70 420 aa11.71□□□□□ -0.53
ACTN1-204ENST00000438964 SCGB3A2Q96PL1 93 aa11.71□□□□□ -0.53
ACTN1-204ENST00000438964 KCNIP3Q9Y2W7 256 aa11.71□□□□□ -0.53
ACTN1-204ENST00000438964 C2orf16Q68DN1 1984 aa11.71□□□□□ -0.53
ACTN1-204ENST00000438964 CCDC187A0A096LP49 1063 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 E5RGE8 158 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 SSSCA1O60232 199 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 SEC11BP0C7V7 166 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 POLR2HP52434 150 aaKnown RBP11.71□□□□□ -0.54
ACTN1-204ENST00000438964 LRRC18Q8N456 261 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF296Q8WUU4 475 aaPredicted RBP11.71□□□□□ -0.54
ACTN1-204ENST00000438964 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 HAS2Q92819 552 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 HIST1H2BLQ99880 126 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 GNG13Q9P2W3 67 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 NSG2Q9Y328 171 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.54
ACTN1-204ENST00000438964 SEMA4FO95754 770 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 FCARP24071 287 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 CLDN17P56750 224 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 NSDHLQ15738 373 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 PRSS8Q16651 343 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 PARM1Q6UWI2 310 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 ARHGEF39Q8N4T4 335 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 CTSEP14091 401 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 TAS2R46P59540 309 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 MPV17LQ2QL34 196 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 OR2AJ1Q8NGZ0 328 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 FAM210BQ96KR6 192 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 KCNK17Q96T54 332 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 PLA2G3Q9NZ20 509 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 SUSD2Q9UGT4 822 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 FOXD3Q9UJU5 478 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-204ENST00000438964 IGHV5-51A0A0C4DH38 117 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 K7N7A8 449 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
ACTN1-204ENST00000438964 HLA-HP01893 362 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 EWSR1Q01844 656 aaKnown RBP eCLIP11.7□□□□□ -0.541e-13■■■■■ 50.4
ACTN1-204ENST00000438964 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 RNASE11Q8TAA1 199 aaKnown RBP11.7□□□□□ -0.54
ACTN1-204ENST00000438964 ADIPOR1Q96A54 375 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 GINS3Q9BRX5 216 aa11.7□□□□□ -0.54
ACTN1-204ENST00000438964 FAM230AA0A1W2PPH8 454 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 A0A1W2PQF6 199 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 IGSF23A1L1A6 192 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 CRYM-AS1A6NIL9 109 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 NPIPB7O75200 414 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 SRP19P09132 144 aaKnown RBP11.69□□□□□ -0.54
ACTN1-204ENST00000438964 HNRNPA1P09651 372 aaKnown RBP eCLIP11.69□□□□□ -0.54
ACTN1-204ENST00000438964 SFTPDP35247 375 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 KIR2DL1P43626 348 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-204ENST00000438964 PKIAP61925 76 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 RPL23AP62750 156 aaKnown RBP11.69□□□□□ -0.54
ACTN1-204ENST00000438964 HIST2H3PS2Q5TEC6 136 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 NIPSNAP3BQ9BS92 247 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 TUBD1Q9UJT1 453 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 NKX2-6A6NCS4 301 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 SHISA7A6NL88 538 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF814B7Z6K7 855 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 MT-ATP6P00846 226 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 PNLIPP16233 465 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 LBX1P52954 281 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 RAB1AP62820 205 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 FZD2Q14332 565 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 IZUMO4Q1ZYL8 232 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 CXorf66Q5JRM2 361 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-204ENST00000438964 C1QL4Q86Z23 238 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 SLC35G3Q8N808 338 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 OR2AE1Q8NHA4 323 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 NAT6Q93015 286 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 TOX2Q96NM4 488 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 GAB2Q9UQC2 676 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 CPAMD8Q8IZJ3 1885 aa11.69□□□□□ -0.54
ACTN1-204ENST00000438964 THADAQ6YHU6 1953 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ARGFXA6NJG6 315 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 CEACAM18A8MTB9 384 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 H3BMH7 237 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 HMGB3O15347 200 aaKnown RBP11.68□□□□□ -0.54
ACTN1-204ENST00000438964 GPR137BO60478 399 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 DDAH2O95865 285 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF728P0DKX0 622 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 CCL5P13501 91 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 CLRN1P58418 232 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ICAM4Q14773 271 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 LCN15Q6UWW0 184 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ZNF721Q8TF20 911 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 SLC25A31Q9H0C2 315 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 FBRSQ9HAH7 460 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 PLEKHA2Q9HB19 425 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 GPR173Q9NS66 373 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 ADAMTS9Q9P2N4 1935 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 SLC6A8P48029 635 aa11.68□□□□□ -0.54
ACTN1-204ENST00000438964 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms