RNA–Protein interactions for RNA: ENST00000437048.6

VPS53-204, Transcript of VPS53, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS53, Length 13,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-204ENST00000437048 PARS2Q7L3T8 475 aaKnown RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 WDFY1Q8IWB7 410 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TMEM37Q8WXS4 190 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TAAR3PQ9P1P4 343 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TAAR2Q9P1P5 351 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PISDQ9UG56 409 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 OR5V1Q9UGF6 321 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 CREBBPQ92793 2442 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 CTAG2O75638 210 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 SP1P08047 785 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 SLC37A1P57057 533 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PHLDA2Q53GA4 152 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 FAM209BQ5JX69 171 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PSMG3Q9BT73 122 aaPredicted RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 PRNDQ9UKY0 176 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TRGV10A0A0A0MS01 117 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 C11orf94C9JXX5 98 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PCMT1P22061 227 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 LBX1P52954 281 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PDPNQ86YL7 162 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 OR5AR1Q8NGP9 310 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TMEM30AQ9NV96 361 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 FTSJ1Q9UET6 329 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 DAPP1Q9UN19 280 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 A4GNTQ9UNA3 340 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 A0A1W2PPC4 97 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 FRG2CA6NGY1 282 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 CNIH1O95406 144 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 IGHA2P01877 340 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 OGG1O15527 345 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 LINC00614P0C842 121 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 CBR1P16152 277 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 DLX1P56177 255 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 RUNX3Q13761 415 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 DEFB115Q30KQ5 88 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 OR6C3Q9NZP0 311 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 MYADML2A6NDP7 307 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 ZNF860A6NHJ4 632 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 A6NIN4 97 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 RHBDL1O75783 438 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TNFRSF1BP20333 461 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 ZNF296Q8WUU4 475 aaPredicted RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 OR2J1Q9GZK6 312 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 SLC22A13Q9Y226 551 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 MPC1Q9Y5U8 109 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 OR2W5A6NFC9 320 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PTGER1P34995 402 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 ID2Q02363 134 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 ZNF385BQ569K4 471 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 DHRS7BQ6IAN0 325 aaPredicted RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 PLA2G12AQ9BZM1 189 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 SLAMF8Q9P0V8 285 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 MARF1Q9Y4F3 1742 aaKnown RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 ABCA7Q8IZY2 2146 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PFN3P60673 137 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 ZNF813Q6ZN06 617 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 RND1Q92730 232 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PARD6GQ9BYG4 376 aaPredicted RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 RAB33BQ9H082 229 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 WNK3Q9BYP7 1800 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 H0YGG7 62 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 SOCS6O14544 535 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TGFBR1P36897 503 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 TMEM33P57088 247 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 FAM189BP81408 668 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 HYAL1Q12794 435 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 SNX22Q96L94 193 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 NRAPQ86VF7 1730 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 PRSS38A1L453 326 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
VPS53-204ENST00000437048 TEX29Q8N6K0 151 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 NT5CQ8TCD5 201 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 CLDN23Q96B33 292 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 AQP10Q96PS8 301 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 GLRX2Q9NS18 164 aa6.45□□□□□ -1.38
VPS53-204ENST00000437048 H3BML4 177 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 DDNO94850 711 aaPredicted RBP6.44□□□□□ -1.38
VPS53-204ENST00000437048 CRYBA1P05813 215 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 ORM2P19652 201 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 SLC36A1Q7Z2H8 476 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 ZNF383Q8NA42 475 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 MYOZ3Q8TDC0 251 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 ADAMTS17Q8TE56 1095 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 GPR84Q9NQS5 396 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 COL22A1Q8NFW1 1626 aaPredicted RBP6.44□□□□□ -1.38
VPS53-204ENST00000437048 A0A087WUJ7 227 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 M0R082 166 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 AKR7A2O43488 359 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 PRF1P14222 555 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 GLULP15104 373 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 WDR31Q8NA23 367 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 MARCH1Q8TCQ1 289 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 IMMP2LQ96T52 175 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 CDCP1Q9H5V8 836 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 RBPJLQ9UBG7 517 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 HLA-DRB1P01911 266 aa6.44□□□□□ -1.38
VPS53-204ENST00000437048 TMEM176BQ3YBM2 270 aaPredicted RBP6.44□□□□□ -1.38
VPS53-204ENST00000437048 RNASEKQ6P5S7 137 aaKnown RBP6.44□□□□□ -1.38
VPS53-204ENST00000437048 OR52B4Q8NGK2 314 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms