RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 GLS2Q9UI32 602 aa12.92□□□□□ -0.34
TREX1-201ENST00000433541 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 KIAA1324LA8MWY0 1029 aaPredicted RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 ENSAO43768 121 aaKnown RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 ALX3O95076 343 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 SELLP14151 372 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 ZNF93P35789 620 aaPredicted RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 EMX1Q04741 257 aaPredicted RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 GPR50Q13585 617 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 TRAM1Q15629 374 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 ARMCX4Q5H9R4 360 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 CEACAM19Q7Z692 300 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 FAM58AQ8N1B3 248 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 NKX3-1Q99801 234 aaPredicted RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 NUDT16L1Q9BRJ7 211 aaKnown RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 SLITRK2Q9H156 845 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 MMP26Q9NRE1 261 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 RBFOX1Q9NWB1 397 aaKnown RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 TMEM160Q9NX00 188 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 KAAG1Q9UBP8 84 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 SLC25A10Q9UBX3 287 aaPredicted RBP12.91□□□□□ -0.34
TREX1-201ENST00000433541 LRRC42Q9Y546 428 aa12.91□□□□□ -0.34
TREX1-201ENST00000433541 NIPBLQ6KC79 2804 aaeCLIP12.9□□□□□ -0.34
TREX1-201ENST00000433541 FN1P02751 2386 aaKnown RBP12.9□□□□□ -0.34
TREX1-201ENST00000433541 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 J3QLI3 93 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 GABRPO00591 440 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 SIGLEC5O15389 551 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 CRLF1O75462 422 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 KNG1P01042 644 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 ACAA1P09110 424 aaPredicted RBP12.9□□□□□ -0.34
TREX1-201ENST00000433541 CPEP16870 476 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 SRD5A1P18405 259 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 FSTP19883 344 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 PSMA1P25786 263 aaKnown RBP12.9□□□□□ -0.34
TREX1-201ENST00000433541 PRDX2P32119 198 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 NPBWR2P48146 333 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 RPS25P62851 125 aaKnown RBP12.9□□□□□ -0.34
TREX1-201ENST00000433541 INSL4Q14641 139 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 RSU1Q15404 277 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 ZNF841Q6ZN19 808 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 ZNF788Q6ZQV5 615 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 BTN2A1Q7KYR7 527 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 RNF144BQ7Z419 303 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 SPARTQ8N0X7 666 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 ZNRF1Q8ND25 227 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 FCGR1BQ92637 280 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 ING4Q9UNL4 249 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 GSTK1Q9Y2Q3 226 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 AUP1Q9Y679 476 aa12.9□□□□□ -0.34
TREX1-201ENST00000433541 SETD2Q9BYW2 2564 aaPredicted RBP12.9□□□□□ -0.34
TREX1-201ENST00000433541 TRBV5-7A0A0A0MS05 114 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 A0A1W2PQ09 198 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 F8VVB4 439 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 F8VWA3 439 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 RGS9O75916 674 aaPredicted RBP12.89□□□□□ -0.35
TREX1-201ENST00000433541 TNFAIP8O95379 198 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 ALDOBP05062 364 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 DUSP1P28562 367 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 OR3A4PP47883 348 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 SCN1BQ07699 218 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 TPBGQ13641 420 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 KCTD21Q4G0X4 260 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
TREX1-201ENST00000433541 ASPHD2Q6ICH7 369 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 PHC2Q8IXK0 858 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 SAXO1Q8IYX7 474 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 FGFRL1Q8N441 504 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 ZNF561Q8N587 486 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 NR1H4Q96RI1 486 aaPredicted RBP12.89□□□□□ -0.35
TREX1-201ENST00000433541 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 FOXJ3Q9UPW0 622 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 INSIG2Q9Y5U4 225 aa12.89□□□□□ -0.35
TREX1-201ENST00000433541 PPIAL4CA0A0B4J2A2 164 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 MAGEA13PA6NCF6 341 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 C22orf46C9J442 243 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 SH2D1BO14796 132 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 TNFRSF13BO14836 293 aaPredicted RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 HTR3BO95264 441 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 ECDO95905 644 aaPredicted RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 HAND1O96004 215 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 CSTBP04080 98 aaKnown RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 CHRM2P08172 466 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 ADRA2CP18825 462 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 GABRR1P24046 479 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 GABRA5P31644 462 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 COL10A1Q03692 680 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 NEDD8Q15843 81 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 DGUOKQ16854 277 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 FAM27D1Q5T7N8 215 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 ZNF529Q6P280 563 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms