RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CENPXA8MT69 81 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 FAM25EA8MYX2 175 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 RAD51BO15315 384 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 CHMP2AO43633 222 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 VAPBO95292 243 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PLEKHA8P1O95397 391 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 TRBV12-3P01733 135 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 HLA-DQA1P01909 254 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PRB1P04280 392 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 LINC00869P0C866 280 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 MYL9P24844 172 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 CXCR1P25024 350 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 AP1S2P56377 157 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PFN3P60673 137 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PSMC5P62195 406 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 XIAPP98170 497 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 SMUG1Q53HV7 270 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 C5orf47Q569G3 176 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF684Q5T5D7 378 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 STEAP4Q687X5 459 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 KDM4DQ6B0I6 523 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 RTL4Q6ZR62 310 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 NDUFAF7Q7L592 441 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF695Q8IW36 515 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 WDFY1Q8IWB7 410 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 CSGALNACT2Q8N6G5 542 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM104Q8NE00 496 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 DEFB124Q8NES8 71 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR52P1PQ8NH57 321 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 ASZ1Q8WWH4 475 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 CACNG8Q8WXS5 425 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 FGF13Q92913 245 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 FOPNLQ96NB1 174 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 SDHCQ99643 169 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM243Q9BU79 118 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 GGTLC1Q9BX51 225 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 MAP1LC3CQ9BXW4 147 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 FGF23Q9GZV9 251 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PRORYQ9H606 182 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 FBXO8Q9NRD0 319 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 HEBP1Q9NRV9 189 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 VAX2Q9UIW0 290 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 HYOU1Q9Y4L1 999 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 KLF12Q9Y4X4 402 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PTPN13Q12923 2485 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 PTPRFP10586 1907 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 CCDC171Q6TFL3 1326 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 MYO18BQ8IUG5 2567 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 CEP295Q9C0D2 2601 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 DSPP15924 2871 aaKnown RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 ITPR1Q14643 2758 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGHV7-4-1A0A0J9YVY3 117 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 SPAARA0A1B0GVQ0 90 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A1W2PNU3 283 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 PSPHP1O15172 72 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RBFOX2O43251 390 aaKnown RBP eCLIP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 TRAPPC6AO75865 159 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGLV2-8P01709 118 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 IGHV3-11P01762 117 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 MUC1P15941 1255 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 TCP1P17987 556 aaKnown RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 GNRHRP30968 328 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 OPRK1P41145 380 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 ETV1P50549 477 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RAB7AP51149 207 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 HCCSP53701 268 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 ATP5J2P56134 94 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 LRRC63Q05C16 580 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 MGAT3Q09327 533 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RBMY1FQ15415 496 aaKnown RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 LINC00483Q53H64 154 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 MPV17L2Q567V2 206 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 LIN9Q5TKA1 542 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 AADACL4Q5VUY2 407 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM236Q5W0B7 351 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 SAXO2Q658L1 398 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR2T5Q6IEZ7 315 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 CD300LGQ6UXG3 332 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 CALHM1Q8IU99 346 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 WDR31Q8NA23 367 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR4M1Q8NGD0 313 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR2T29Q8NH02 315 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM234Q8WY98 164 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 C19orf60Q96EN9 201 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RDH12Q96NR8 316 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RBBP8Q99708 897 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RNF5Q99942 180 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 TM6SF2Q9BZW4 377 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 ARMC7Q9H6L4 198 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 WFDC1Q9HC57 220 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 NECAP2Q9NVZ3 263 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 RBFOX1Q9NWB1 397 aaKnown RBP1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 GGA2Q9UJY4 613 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 GINS2Q9Y248 185 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 SIGLEC7Q9Y286 467 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 SVILO95425 2214 aa1.84□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A1B0GUL6 1792 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 ABCB11O95342 1321 aa1.84□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF532Q9HCE3 1301 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms