RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 UBE2V2Q15819 145 aa12.32□□□□□ -0.44
HERC3-206ENST00000431413 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
HERC3-206ENST00000431413 KCTD20Q7Z5Y7 419 aa12.32□□□□□ -0.44
HERC3-206ENST00000431413 EGFL6Q8IUX8 553 aa12.32□□□□□ -0.44
HERC3-206ENST00000431413 ENTHD1Q8IYW4 607 aa12.32□□□□□ -0.44
HERC3-206ENST00000431413 TRUB1Q8WWH5 349 aaKnown RBP12.32□□□□□ -0.44
HERC3-206ENST00000431413 FOXRED1Q96CU9 486 aaPredicted RBP12.32□□□□□ -0.44
HERC3-206ENST00000431413 MTCH1Q9NZJ7 389 aa12.32□□□□□ -0.44
HERC3-206ENST00000431413 GNG8Q9UK08 70 aa12.32□□□□□ -0.44
HERC3-206ENST00000431413 LOC107986453A0A1B0GWG9 222 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 H3BSH0 61 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 CSF1P09603 554 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 OCM2P0CE71 109 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
HERC3-206ENST00000431413 RBP2P50120 134 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 BMXP51813 675 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 ACTC1P68032 377 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 ACTA1P68133 377 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 MEF2CQ06413 473 aaPredicted RBP12.31□□□□□ -0.44
HERC3-206ENST00000431413 HERPUD1Q15011 391 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 TMEM244Q5VVB8 128 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 SLC25A26Q70HW3 274 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 OR8H2Q8N162 312 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 DNAAF1Q8NEP3 725 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 SLAMF9Q96A28 289 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 EME1Q96AY2 570 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 AJUBAQ96IF1 538 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 SNX22Q96L94 193 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 MYCBPQ99417 103 aaPredicted RBP12.31□□□□□ -0.44
HERC3-206ENST00000431413 CDCA4Q9BXL8 241 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 ABCB10Q9NRK6 738 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 GLS2Q9UI32 602 aa12.31□□□□□ -0.44
HERC3-206ENST00000431413 TBL2Q9Y4P3 447 aaKnown RBP12.31□□□□□ -0.44
HERC3-206ENST00000431413 hADV38S2A0JD32 116 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 SAC3D1A6NKF1 404 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 SNTNA6NMZ2 147 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 VGLL3A8MV65 326 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 H3BUI4 141 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 ZNF737O75373 536 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 INMTO95050 263 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 ARG1P05089 322 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 PRKACBP22694 351 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 PEX2P28328 305 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 EFNB2P52799 333 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 PPP1R35Q8TAP8 253 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 FAM110DQ8TAY7 271 aaPredicted RBP12.3□□□□□ -0.44
HERC3-206ENST00000431413 EMG1Q92979 244 aaKnown RBP12.3□□□□□ -0.44
HERC3-206ENST00000431413 MALSU1Q96EH3 234 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 ZNF714Q96N38 554 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 SEBOXQ9HB31 216 aaPredicted RBP12.3□□□□□ -0.44
HERC3-206ENST00000431413 PITPNC1Q9UKF7 332 aa12.3□□□□□ -0.44
HERC3-206ENST00000431413 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 DAPL1A0PJW8 107 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 TSPAN15O95858 294 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 ZNF20P17024 532 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 DLX6P56179 175 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 MTCP1P56278 107 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 OR12D2P58182 307 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 DYNC1I2Q13409 638 aaKnown RBP12.29□□□□□ -0.44
HERC3-206ENST00000431413 TP53I3Q53FA7 332 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 MEDAGQ5VYS4 303 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 LHFPL4Q7Z7J7 247 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 RPS4Y2Q8TD47 263 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
HERC3-206ENST00000431413 NKX3-1Q99801 234 aaPredicted RBP12.29□□□□□ -0.44
HERC3-206ENST00000431413 NEK6Q9HC98 313 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 VWFP04275 2813 aa12.29□□□□□ -0.44
HERC3-206ENST00000431413 F8VVB4 439 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 F8VWA3 439 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 HAND1O96004 215 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 IGHV1-8P0DP01 117 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 GABRR1P24046 479 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 POU3F4P49335 361 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 ISL1P61371 349 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 ZNF85Q03923 595 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 EDDM3AQ14507 147 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 GRK1Q15835 563 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 FAM189A2Q15884 450 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 SPIN3Q5JUX0 258 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 SLC25A30Q5SVS4 291 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 ZNF626Q68DY1 528 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 CRIP3Q6Q6R5 217 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 ZBTB49Q6ZSB9 765 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 UTS2BQ765I0 119 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 RDH10Q8IZV5 341 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 FAM58AQ8N1B3 248 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 KLHDC1Q8N7A1 406 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 OR11H6Q8NGC7 330 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 OR2G2Q8NGZ5 317 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 SPSB1Q96BD6 273 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 HRASLS5Q96KN8 279 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 PCDHGB5Q9Y5G0 923 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 LINC00312Q9Y6C7 94 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
HERC3-206ENST00000431413 TRBV2A0A0J9YWF9 115 aa12.27□□□□□ -0.45
HERC3-206ENST00000431413 FUOMA2VDF0 154 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms