RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 UNQ9370/PRO34162Q6UXP9 181 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 C12orf54Q6X4T0 127 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 ANGPTL5Q86XS5 388 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 CALHM1Q8IU99 346 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 DNAAF1Q8NEP3 725 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 AQP3Q92482 292 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 DERL3Q96Q80 235 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 SPACA5Q96QH8 159 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 TRAV8-7A0A075B6U6 113 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 TRAV40A0A0B4J280 105 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 TMEM89A2RUT3 159 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 TRIM64CA6NLI5 447 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-204ENST00000430071 ADAM20O43506 726 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 SYNGR1O43759 233 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 ALX3O95076 343 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 TFF1P04155 84 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 IGFBP3P17936 291 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-204ENST00000430071 PRKACBP22694 351 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 CFHR2P36980 270 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 HAAOP46952 286 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 GP2P55259 537 aaKnown RBP14.03□□□□□ -0.16
UBE3D-204ENST00000430071 FGF12P61328 243 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 FAM27D1Q5T7N8 215 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 TMEM91Q6ZNR0 172 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 ZNF573Q86YE8 665 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 LRRC29Q8WV35 223 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 SPSB1Q96BD6 273 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 UPRTQ96BW1 309 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 BORCS8Q96FH0 119 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 NOX4Q9NPH5 578 aa14.03□□□□□ -0.16
UBE3D-204ENST00000430071 OOEPA6NGQ2 149 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 DNAJC9-AS1A6NH13 148 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 J3QT63 122 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 PLATP00750 562 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 SFTPBP07988 381 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 SMIM18P0DKX4 95 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 AMY2BP19961 511 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 RAB3AP20336 220 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 GABRA5P31644 462 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 RBP2P50120 134 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 SYT6Q5T7P8 510 aaPredicted RBP14.02□□□□□ -0.17
UBE3D-204ENST00000430071 BRD3OSQ6XYD6 125 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 NLRC3Q7RTR2 1065 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 GCDHQ92947 438 aaPredicted RBP14.02□□□□□ -0.17
UBE3D-204ENST00000430071 MUL1Q969V5 352 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 PPIL3Q9H2H8 161 aaKnown RBP14.02□□□□□ -0.17
UBE3D-204ENST00000430071 NDUFB11Q9NX14 153 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 PKD1L1Q8TDX9 2849 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 DSCAML1Q8TD84 2053 aa14.02□□□□□ -0.17
UBE3D-204ENST00000430071 AKR7A2O43488 359 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 GPX5O75715 221 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 FSTP19883 344 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 MPZP25189 248 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 TGFBR2P37173 567 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 MTCP1P56278 107 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 FABP5Q01469 135 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 RUSC1-AS1Q66K80 236 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 BTNL3Q6UXE8 466 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 LHFPL2Q6ZUX7 228 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 CEACAM19Q7Z692 300 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 OR10Z1Q8NGY1 313 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 RFT1Q96AA3 541 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 ZNF488Q96MN9 340 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 JMJD8Q96S16 334 aa14.01□□□□□ -0.17
UBE3D-204ENST00000430071 MS4A7Q9GZW8 240 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-204ENST00000430071 MAGEA13PA6NCF6 341 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 SRRM5B3KS81 715 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 CCRL2O00421 344 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 HCKP08631 526 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 OCMP0CE72 109 aaPredicted RBP14□□□□□ -0.17
UBE3D-204ENST00000430071 CPT2P23786 658 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 MAPK3P27361 379 aaPredicted RBP14□□□□□ -0.17
UBE3D-204ENST00000430071 ATP1B3P54709 279 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 GMFBP60983 142 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 TRAM1Q15629 374 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 OR5T2Q8NGG2 359 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 OR52N4Q8NGI2 321 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 THRSPQ92748 146 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 CCL13Q99616 98 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 NKX3-1Q99801 234 aaPredicted RBP14□□□□□ -0.17
UBE3D-204ENST00000430071 PKIBQ9C010 78 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 WDR13Q9H1Z4 485 aa14□□□□□ -0.17
UBE3D-204ENST00000430071 TRAV38-1A0A0B4J264 116 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 GABRPO00591 440 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 UCHL1P09936 223 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 PGA5P0DJD9 388 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 SELLP14151 372 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 MMP9P14780 707 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 PSMA1P25786 263 aaKnown RBP13.99□□□□□ -0.17
UBE3D-204ENST00000430071 POU3F4P49335 361 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 COMPP49747 757 aaPredicted RBP13.99□□□□□ -0.17
UBE3D-204ENST00000430071 PPP3R1P63098 170 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 IL24Q13007 206 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 BAMBIQ13145 260 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 KISS1Q15726 138 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 TEX36Q5VZQ5 186 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 CD200R1LQ6Q8B3 271 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 SLC25A26Q70HW3 274 aa13.99□□□□□ -0.17
UBE3D-204ENST00000430071 POC1AQ8NBT0 407 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms