RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 NPIPB9F8W1W9 429 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 FABP7O15540 132 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 DLX5P56178 289 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 S100A7AQ86SG5 101 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 ZNRF4Q8WWF5 429 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 RAB1CQ92928 201 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 PROB1E7EW31 1015 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 ALOX5APP20292 161 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 CMTM4Q8IZR5 234 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 OR51S1Q8NGJ8 323 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 ZFC3H1O60293 1989 aaKnown RBP11.33□□□□□ -0.6
PTCH1-207ENST00000429896 CHEK1O14757 476 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 SPRY1O43609 319 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-207ENST00000429896 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-207ENST00000429896 C1orf174Q8IYL3 243 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 OR10R2Q8NGX6 335 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 ASCL3Q9NQ33 180 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 ADRB1P08588 477 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 PTBP1P26599 531 aaKnown RBP eCLIP11.32□□□□□ -0.63e-8■■■■□ 20.8
PTCH1-207ENST00000429896 ZNF816Q0VGE8 651 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-207ENST00000429896 FAM27BQ5VT28 67 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 ORAI1Q96D31 301 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 MS4A5Q9H3V2 200 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 KNTC1P50748 2209 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 GLAP06280 429 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 STAC2Q6ZMT1 411 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 SLC36A1Q7Z2H8 476 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 TERB2Q8NHR7 220 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 WDYHV1Q96HA8 205 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 WFDC6Q9BQY6 131 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 MPC1Q9Y5U8 109 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 CADM3Q8N126 398 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 GPA33Q99795 319 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 IGKV1D-42A0A075B6H8 117 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 GPX5O75715 221 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 ONECUT2O95948 504 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 GNG10P50151 68 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 CCR9P51686 369 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 OR2G3Q8NGZ4 309 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
PTCH1-207ENST00000429896 FAM212BQ9NTI7 297 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-207ENST00000429896 TREM2Q9NZC2 230 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 DOCK8Q8NF50 2099 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 ARPC4-TTLL3A0A0A6YYG9 625 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 F6UZH7 168 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 NTF3P20783 257 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 LIMS1P48059 325 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM123Q8N131 208 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 C17orf78Q8N4C9 275 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 ST8SIA4Q92187 359 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 RD3LP0DJH9 198 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 UBE2G1P62253 170 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 ACSF3Q4G176 576 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-207ENST00000429896 RBMS3Q6XE24 437 aaKnown RBP11.32□□□□□ -0.6
PTCH1-207ENST00000429896 SLC26A10Q8NG04 563 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 SLC25A40Q8TBP6 338 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 LRRC29Q8WV35 223 aa11.32□□□□□ -0.6
PTCH1-207ENST00000429896 GPR12P47775 334 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 OSR2Q8N2R0 312 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 C2CD4CQ8TF44 421 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 FAM58AQ8N1B3 248 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM45BQ96B21 275 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 PSMB3P49720 205 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 OR8B12Q8NGG6 310 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 GPX7Q96SL4 187 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-207ENST00000429896 RHNO1Q9BSD3 238 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 KIR2DS1A0A191URI9 304 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 A0A1W2PRD5 423 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 A0A1W2PRF3 423 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 A0A1W2PRM7 423 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 KIR2DS4P43632 304 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 KIR2DS1Q14954 304 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 ZNF2Q9BSG1 426 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-207ENST00000429896 PINLYPA6NC86 204 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 TGFBR1P36897 503 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 OR5I1Q13606 314 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 TPBGQ13641 420 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 FCN2Q15485 313 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 NSUN5P2Q63ZY6 315 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 OR10K2Q6IF99 312 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
PTCH1-207ENST00000429896 SAP30LQ9HAJ7 183 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 MED9Q9NWA0 146 aa11.31□□□□□ -0.6
PTCH1-207ENST00000429896 CPN1P15169 458 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 PCMT1P22061 227 aa11.3□□□□□ -0.6
PTCH1-207ENST00000429896 S100A7P31151 101 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms