RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	RDH10	Q8IZV5	341 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	OR2G2	Q8NGZ5	317 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	PP6455	Q8WZ26	134 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	CEP19	Q96LK0	163 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	ADI1	Q9BV57	179 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	HEXA-AS1	Q9H8Q6	139 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	SEBOX	Q9HB31	216 aa	Predicted RBP	14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	IMPAD1	Q9NX62	359 aa		14.41	□□□□□ -0.1
MRPL28-203	ENST00000429738	IGKV1-9	A0A0C4DH69	117 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738		H3BUX3	64 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	SERPINA3	P01011	423 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	ISG15	P05161	165 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	CHRM2	P08172	466 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	ERVFRD-1	P60508	538 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	ACTC1	P68032	377 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	ACTA1	P68133	377 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	TMEM244	Q5VVB8	128 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	MEDAG	Q5VYS4	303 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	ZFP1	Q6P2D0	407 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	CRIP3	Q6Q6R5	217 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	DNAAF1	Q8NEP3	725 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	RNFT2	Q96EX2	444 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	ADAT3	Q96EY9	351 aa	Predicted RBP	14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	BORCS8	Q96FH0	119 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	SSX3	Q99909	188 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	FRRS1L	Q9P0K9	344 aa		14.4	□□□□□ -0.1
MRPL28-203	ENST00000429738	hCG_1809904	A0A1W2PP81	198 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738		A0A1W2PPE2	198 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738		A0A1W2PR64	198 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738		A0A1W2PRV1	198 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	GABRB1	P18505	474 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	NANOS3	P60323	173 aa	Known RBP	14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	CNN3	Q15417	329 aa	Known RBP	14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	C2orf68	Q2NKX9	166 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZIK1	Q3SY52	487 aa	Predicted RBP	14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	SLC25A26	Q70HW3	274 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	UTS2B	Q765I0	119 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	SLAMF9	Q96A28	289 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	MBOAT4	Q96T53	435 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	EXOG	Q9Y2C4	368 aa	Known RBP	14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	ORC6	Q9Y5N6	252 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	NOTCH3	Q9UM47	2321 aa		14.39	□□□□□ -0.11
MRPL28-203	ENST00000429738	MEGF11	A6BM72	1044 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	FAM90A8P	A6NJQ4	464 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	SLC16A6	O15403	523 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	ALX3	O95076	343 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	RBP4	P02753	201 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	CCR9	P51686	369 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	BMX	P51813	675 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR12D2	P58182	307 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	LRRC75B	Q2VPJ9	315 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	SLC35E4	Q6ICL7	350 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	TCF23	Q7RTU1	214 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738		Q8IYB0	196 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR8H2	Q8N162	312 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	ASCC1	Q8N9N2	400 aa	Known RBP	14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	SNX22	Q96L94	193 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	PPA2	Q9H2U2	334 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	FBLN5	Q9UBX5	448 aa		14.38	□□□□□ -0.11
MRPL28-203	ENST00000429738	NBEAL2	Q6ZNJ1	2754 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	TRBV2	A0A0J9YWF9	115 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	DAPL1	A0PJW8	107 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	TMEM82	A0PJX8	343 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	ODF3B	A8MYP8	253 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	CSF1	P09603	554 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	PIP	P12273	146 aa	Predicted RBP	14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	ATF1	P18846	271 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	PAX6	P26367	422 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	RBP2	P50120	134 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	ATP1B3	P54709	279 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF91	Q05481	1191 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF782	Q6ZMW2	699 aa	Predicted RBP	14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	EGFL6	Q8IUX8	553 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	CBR4	Q8N4T8	237 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	ACBD7	Q8N6N7	88 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	PPP1R35	Q8TAP8	253 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	PIFO	Q8TCI5	191 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	EMG1	Q92979	244 aa	Known RBP	14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	PELI1	Q96FA3	418 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	IL36RN	Q9UBH0	155 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	AASS	Q9UDR5	926 aa		14.37	□□□□□ -0.11
MRPL28-203	ENST00000429738	VGLL3	A8MV65	326 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	HAND1	O96004	215 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	HTR1A	P08908	422 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF728	P0DKX0	622 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	PRKACB	P22694	351 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	COX7A1	P24310	79 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	AZGP1	P25311	298 aa	Known RBP	14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	NPBWR2	P48146	333 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF146	Q15072	292 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	BEAN1	Q3B7T3	259 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	GDPD3	Q7L5L3	318 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	LHFPL4	Q7Z7J7	247 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	ENTHD1	Q8IYW4	607 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR51A4	Q8NGJ6	313 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	OR10AC1	Q8NH08	325 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	FGGY	Q96C11	551 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	LGALS12	Q96DT0	336 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	C4orf36	Q96KX1	117 aa		14.36	□□□□□ -0.11
MRPL28-203	ENST00000429738	ZNF649	Q9BS31	505 aa		14.36	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms