RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RASL10BQ96S79 203 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 TMEM100Q9NV29 134 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 CARHSP1Q9Y2V2 147 aaKnown RBP10.89□□□□□ -0.67
CDH3-202ENST00000429102 A0A096LPE4 126 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 A0A1W2PPZ6 126 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 HSD17B6O14756 317 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 S100A2P29034 98 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 HERV-K104P61576 105 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 RPS18P62269 152 aaKnown RBP10.89□□□□□ -0.67
CDH3-202ENST00000429102 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
CDH3-202ENST00000429102 SHDQ96IW2 340 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 CRLF2Q9HC73 371 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 ANXA10Q9UJ72 324 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 ST3GAL6Q9Y274 331 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 PRR14LQ5THK1 2151 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 CCDC187A0A096LP49 1063 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 JTBO76095 146 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 FCGR3AP08637 254 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 EDN3P14138 238 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 MSR1P21757 451 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 HTR5AP47898 357 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 ECH1Q13011 328 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 SOHLH1Q5JUK2 328 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 RHOVQ96L33 236 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 NELFAQ9H3P2 528 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 CACFD1Q9UGQ2 172 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 DKKL1Q9UK85 242 aa10.89□□□□□ -0.67
CDH3-202ENST00000429102 BORCS7-ASMTA0A0B4J1R7 106 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
CDH3-202ENST00000429102 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
CDH3-202ENST00000429102 SHISA7A6NL88 538 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 HLA-HP01893 362 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 ROS1P08922 2347 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 RPS2P15880 293 aaKnown RBP10.88□□□□□ -0.67
CDH3-202ENST00000429102 SULT1A2P50226 295 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 RAB2AP61019 212 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 ZNF574Q6ZN55 896 aaPredicted RBP10.88□□□□□ -0.67
CDH3-202ENST00000429102 HIST2H3AQ71DI3 136 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 GJC3Q8NFK1 279 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 TCTEX1D2Q8WW35 142 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 MR1Q95460 341 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 C19orf12Q9NSK7 152 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 WRBO00258 174 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 HMGB3O15347 200 aaKnown RBP10.88□□□□□ -0.67
CDH3-202ENST00000429102 SCGNO76038 276 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 CCL3P10147 92 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 SULT1A1P50225 295 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 STX12Q86Y82 276 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 D2HGDHQ8N465 521 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 WDSUB1Q8N9V3 476 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 IL1F10Q8WWZ1 152 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 OXGR1Q96P68 337 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 OCSTAMPQ9BR26 566 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 OCIAD1Q9NX40 245 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 RARRES3Q9UL19 164 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 EML6Q6ZMW3 1958 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 A0A1W2PR77 199 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 IFI6P09912 130 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 TBPP20226 339 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 PLCXD3Q63HM9 321 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 NSUN5P2Q63ZY6 315 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 ZNF441Q8N8Z8 693 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 SUMF2Q8NBJ7 301 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 SMIM8Q96KF7 97 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
CDH3-202ENST00000429102 BOD1L1Q8NFC6 3051 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 H0YL77 283 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 DEDDO75618 318 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 DHRS3O75911 302 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 OR2C1O95371 312 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 GALNSP34059 522 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 DCDP81605 110 aaKnown RBP10.87□□□□□ -0.67
CDH3-202ENST00000429102 NAAAQ02083 359 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
CDH3-202ENST00000429102 GNMTQ14749 295 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 CXorf66Q5JRM2 361 aaPredicted RBP10.87□□□□□ -0.67
CDH3-202ENST00000429102 MVB12AQ96EY5 273 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 TWSG1Q9GZX9 223 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 METTL9Q9H1A3 318 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 PNRC2Q9NPJ4 139 aaKnown RBP10.87□□□□□ -0.67
CDH3-202ENST00000429102 GSN-AS1Q9NRJ2 163 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 SLC2A9Q9NRM0 540 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 PTRH2Q9Y3E5 179 aaKnown RBP10.87□□□□□ -0.67
CDH3-202ENST00000429102 LIPGQ9Y5X9 500 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 IGHMP01871 453 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 NPBWR2P48146 333 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 ACER2Q5QJU3 275 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 SLC25A47Q6Q0C1 308 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 BTNL8Q6UX41 500 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 SLC25A26Q70HW3 274 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 OR5L2Q8NGL0 311 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 OR51H1Q8NH63 302 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 MRGPRX4Q96LA9 322 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 ZMAT5Q9UDW3 170 aaKnown RBP10.87□□□□□ -0.67
CDH3-202ENST00000429102 DCHS1Q96JQ0 3298 aa10.87□□□□□ -0.67
CDH3-202ENST00000429102 BCAT2O15382 392 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms