RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 OR12D2P58182 307 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 SLC34A1Q06495 639 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 IL24Q13007 206 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 TMEM95Q3KNT9 176 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 OXLD1Q5BKU9 147 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 NXNL2Q5VZ03 156 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 FAHD1Q6P587 224 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 CCBE1Q6UXH8 406 aaPredicted RBP11.72□□□□□ -0.53
SDC1-204ENST00000429035 GID4Q8IVV7 300 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 ZNF676Q8N7Q3 588 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 TMEM163Q8TC26 289 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 PIFOQ8TCI5 191 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 MNTQ99583 582 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 ADI1Q9BV57 179 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 PRSS22Q9GZN4 317 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 CHST6Q9GZX3 395 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 MMP28Q9H239 520 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 POMPQ9Y244 141 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 HILPDAQ9Y5L2 63 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
SDC1-204ENST00000429035 A0A1W2PRX2 142 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 A6NDX4 124 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 C17orf98A8MV24 154 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 ODF3BA8MYP8 253 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 XPNPEP2O43895 674 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 VDAC2P45880 294 aaPredicted RBP11.71□□□□□ -0.53
SDC1-204ENST00000429035 POU3F4P49335 361 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 DLX6P56179 175 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 ACTA2P62736 377 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 ACTG2P63267 376 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 ACTC1P68032 377 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 ACTA1P68133 377 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 AADACL4Q5VUY2 407 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 SLX4IPQ5VYV7 408 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 ZNF626Q68DY1 528 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 TRAPPC6BQ86SZ2 158 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 OR8H2Q8N162 312 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 OR10H4Q8NGA5 316 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 OR4F17Q8NGA8 305 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 SGCDQ92629 289 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 NRBF2Q96F24 287 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 BORCS8Q96FH0 119 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 OR4F4Q96R69 305 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 CITED2Q99967 270 aaPredicted RBP11.71□□□□□ -0.53
SDC1-204ENST00000429035 CDCA4Q9BXL8 241 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 IL36RNQ9UBH0 155 aa11.71□□□□□ -0.53
SDC1-204ENST00000429035 KIAA2026Q5HYC2 2103 aa11.71□□□□□ -0.54
SDC1-204ENST00000429035 MEGF11A6BM72 1044 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 DHRS7CA6NNS2 312 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 ZAR1LA6NP61 321 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 F8VVB4 439 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 F8VWA3 439 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 DNAJC8O75937 253 aaPredicted RBP11.7□□□□□ -0.54
SDC1-204ENST00000429035 HAND1O96004 215 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 CALCBP10092 127 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 EPHA2P29317 976 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 GRK1Q15835 563 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 LDLRAD2Q5SZI1 272 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 C12orf73Q69YU5 71 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 Q6ZPA2 131 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 TCF23Q7RTU1 214 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 FAM220AQ7Z4H9 259 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 NDUFA11Q86Y39 141 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 EGFL6Q8IUX8 553 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 MALSU1Q96EH3 234 aa11.7□□□□□ -0.54
SDC1-204ENST00000429035 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 LOC107986453A0A1B0GWG9 222 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 hADV38S2A0JD32 116 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 FAM90A8PA6NJQ4 464 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 ZNF737O75373 536 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 CYB5AP00167 134 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 IGHA1P01876 353 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 CCL1P22362 96 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 PEX2P28328 305 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 DUSP1P28562 367 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 ATP6V1E1P36543 226 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 EMX1Q04741 257 aaPredicted RBP11.69□□□□□ -0.54
SDC1-204ENST00000429035 UBE2V2Q15819 145 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 FBLN7Q53RD9 439 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 KPRPQ5T749 579 aaPredicted RBP11.69□□□□□ -0.54
SDC1-204ENST00000429035 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 CATSPERDQ86XM0 798 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 SNX22Q96L94 193 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 CHST5Q9GZS9 411 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 SESN1Q9Y6P5 492 aa11.69□□□□□ -0.54
SDC1-204ENST00000429035 A0A1W2PQL4 384 aaPredicted RBP11.68□□□□□ -0.54
SDC1-204ENST00000429035 FAM172BPA6NC97 362 aa11.68□□□□□ -0.54
SDC1-204ENST00000429035 METTL15A6NJ78 407 aa11.68□□□□□ -0.54
SDC1-204ENST00000429035 G3V2T6 193 aa11.68□□□□□ -0.54
SDC1-204ENST00000429035 SERPINA3P01011 423 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms