RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CAPZA1P52907 286 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 RBM11P57052 281 aaKnown RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 ERVK11-1P61568 191 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 ZNF181Q2M3W8 571 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 CDNFQ49AH0 187 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 FAM201AQ5SY85 155 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 SFRP4Q6FHJ7 346 aaPredicted RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 BRICD5Q6PL45 260 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 WDR82Q6UXN9 313 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 BAIAP2L2Q6UXY1 529 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 MEX3BQ6ZN04 569 aaKnown RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 DCDC5Q6ZRR9 648 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 C6orf201Q7Z4U5 140 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 MOGAT3Q86VF5 341 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 TMEM200AQ86VY9 491 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 MKXQ8IYA7 352 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 SAXO1Q8IYX7 474 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 CHST4Q8NCG5 386 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 C19orf18Q8NEA5 215 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 Q8NFD4 153 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 SMIM4Q8WVI0 70 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 EMG1Q92979 244 aaKnown RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 CPNE2Q96FN4 548 aaPredicted RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 HDHD3Q9BSH5 251 aaPredicted RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 PECRQ9BY49 303 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 SLC22A4Q9H015 551 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 DIABLOQ9NR28 239 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 C1orf123Q9NWV4 160 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 CISD1Q9NZ45 108 aaKnown RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 TREM2Q9NZC2 230 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 GHRLQ9UBU3 117 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 ST3GAL6Q9Y274 331 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 NOP16Q9Y3C1 178 aaKnown RBP7.5□□□□□ -1.21
SMC6-204ENST00000428868 CRYBG3Q68DQ2 2970 aa7.5□□□□□ -1.21
SMC6-204ENST00000428868 A0A1B0GVG6 124 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 PLSCR5A0PG75 271 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 METTL21EPA6NDL7 271 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 C17orf100A8MU93 164 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 TRAPPC2LH3BP13 241 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 CTDSPLO15194 276 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 GSTZ1O43708 216 aaPredicted RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 PTBP3O95758 552 aaKnown RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 CLDN1O95832 211 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 CSTBP04080 98 aaKnown RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 GTF2F2P13984 249 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 HIST1H1DP16402 221 aaKnown RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 CHATP28329 748 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 BLVRBP30043 206 aaPredicted RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 APOBEC3AP31941 199 aaPredicted RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 SERPINF1P36955 418 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 GDNFP39905 211 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 FGF12P61328 243 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 TNFAIP6P98066 277 aaPredicted RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 NKAPLQ5M9Q1 402 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 ELP2Q6IA86 826 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 Q6ZPA2 131 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 DNM1P46Q6ZS02 220 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 Q6ZTK2 550 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 GLCCI1Q86VQ1 547 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 FAM58AQ8N1B3 248 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 POC1AQ8NBT0 407 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 LRRC29Q8WV35 223 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 DHRS9Q9BPW9 319 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 NRIP2Q9BQI9 281 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 SULT4A1Q9BR01 284 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 THAP7Q9BT49 309 aaPredicted RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 URM1Q9BTM9 101 aaKnown RBP7.49□□□□□ -1.21
SMC6-204ENST00000428868 PALMDQ9NP74 551 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 KLK11Q9UBX7 282 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 METRNQ9UJH8 293 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 CACNG2Q9Y698 323 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 PTPN13Q12923 2485 aa7.49□□□□□ -1.21
SMC6-204ENST00000428868 IGHV3OR15-7A0A075B7D8 119 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 A0A0A6YYH2 397 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 hCG_1807616A0A1W2PRN6 198 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 A1L4Q6 167 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 A6NJ64 397 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 PRSS44E7EML9 344 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 GABARAPH6UMI1 98 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 M0R233 179 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 ORC5O43913 435 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 ZNF205O95201 554 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 CYB5R3P00387 301 aaPredicted RBP7.48□□□□□ -1.21
SMC6-204ENST00000428868 CD8AP01732 235 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 CPT2P23786 658 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 CD80P33681 288 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 SELENOVP59797 346 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 CCL8P80075 99 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 PITPNAQ00169 270 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 KLF9Q13886 244 aaPredicted RBP7.48□□□□□ -1.21
SMC6-204ENST00000428868 EFNB3Q15768 340 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 TRIQKQ629K1 86 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 FAAP20Q6NZ36 180 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 Q6P435 159 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 C5orf24Q7Z6I8 188 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 GCSAMQ8N6F7 178 aa7.48□□□□□ -1.21
SMC6-204ENST00000428868 GVQW1Q8N7I0 195 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms