RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CDRT1O95170 752 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 FSTL3O95633 263 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 NDUFB7P17568 137 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
SGCE-204ENST00000428696 PSMA1P25786 263 aaKnown RBP12.13□□□□□ -0.47
SGCE-204ENST00000428696 OR3A4PP47883 348 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 FABP5Q01469 135 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 KRTAP1-1Q07627 177 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 SSX1Q16384 188 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 STUMQ69YW2 141 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 FAM58AQ8N1B3 248 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 TMEM185AQ8NFB2 350 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 OR10K1Q8NGX5 313 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 CTSZQ9UBR2 303 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 FOXJ3Q9UPW0 622 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 GSTK1Q9Y2Q3 226 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 TLN2Q9Y4G6 2542 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 ABCA1O95477 2261 aa12.13□□□□□ -0.47
SGCE-204ENST00000428696 IGKV1D-17A0A075B6S4 117 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 LOC105371242A0A075B767 164 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 TRAV20A0A0B4J274 112 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 INAFM1C9JVW0 142 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 F5H0A9 414 aaPredicted RBP12.12□□□□□ -0.47
SGCE-204ENST00000428696 GABRPO00591 440 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 ARL6IP5O75915 188 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 HTR3BO95264 441 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 ALDOBP05062 364 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 SELLP14151 372 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 SRMP19623 302 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
SGCE-204ENST00000428696 PTGFRP43088 359 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 IL13RA1P78552 427 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 LRRC10Q5BKY1 277 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
SGCE-204ENST00000428696 ZNF529Q6P280 563 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 TMEM91Q6ZNR0 172 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 Q8IYB0 196 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 FGFRL1Q8N441 504 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 MUL1Q969V5 352 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 PPIL3Q9H2H8 161 aaKnown RBP12.12□□□□□ -0.47
SGCE-204ENST00000428696 MMP26Q9NRE1 261 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 IL36RNQ9UBH0 155 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 GLS2Q9UI32 602 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
SGCE-204ENST00000428696 GPX5O75715 221 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 KNG1P01042 644 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 CSTBP04080 98 aaKnown RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 FSTP19883 344 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 DVL1P1P54792 670 aaPredicted RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 PDCD1Q15116 288 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 ASCC1Q8N9N2 400 aaKnown RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 C1orf159Q96HA4 380 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 GAFA1Q96PS6 74 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 SF3B6Q9Y3B4 125 aaKnown RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 A0A0G2JMP0 313 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 A0A0X1KG70 313 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 TNFRSF13BO14836 293 aaPredicted RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 SFTPBP07988 381 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 AMY2BP19961 511 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 GABRR1P24046 479 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 ZP1P60852 638 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 COL10A1Q03692 680 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 DGUOKQ16854 277 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 CR1LQ2VPA4 569 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 SLC22A6Q4U2R8 563 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 ATPAF1Q5TC12 328 aaPredicted RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 CD276Q5ZPR3 534 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 C22orf42Q6IC83 251 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 ZNF788Q6ZQV5 615 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 ZSCAN4Q8NAM6 433 aaPredicted RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 OR4M2Q8NGB6 313 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 C7orf69Q9H7B7 122 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 CNTD2Q9H8S5 307 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 HMG20AQ9NP66 347 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 NDUFB11Q9NX14 153 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 SSR3Q9UNL2 185 aa12.11□□□□□ -0.47
SGCE-204ENST00000428696 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
SGCE-204ENST00000428696 MTORP42345 2549 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 LOC100506127A0A0U1RQW1 187 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 SIRPB1O00241 398 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 SH2D1BO14796 132 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 HAND1O96004 215 aa12.1□□□□□ -0.47
SGCE-204ENST00000428696 UCHL1P09936 223 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms