RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FUT6P51993 359 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 GTF2A1P52655 376 aaPredicted RBP10.62□□□□□ -0.71
VRK3-203ENST00000424804 KRT74Q7RTS7 529 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 CALHM1Q8IU99 346 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 SYS1Q8N2H4 156 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 POC1AQ8NBT0 407 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 OR13C9Q8NGT0 318 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 C8orf46Q8TAG6 207 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 TBC1D15Q8TC07 691 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 SLAMF9Q96A28 289 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 RFT1Q96AA3 541 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 C12orf43Q96C57 262 aaKnown RBP10.62□□□□□ -0.71
VRK3-203ENST00000424804 AJUBAQ96IF1 538 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 PDCD1LG2Q9BQ51 273 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 DCTN5Q9BTE1 182 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 CHST5Q9GZS9 411 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 C16orf95Q9H693 158 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 FGF20Q9NP95 211 aaPredicted RBP10.62□□□□□ -0.71
VRK3-203ENST00000424804 CHCHD3Q9NX63 227 aaKnown RBP10.62□□□□□ -0.71
VRK3-203ENST00000424804 SLC25A10Q9UBX3 287 aaPredicted RBP10.62□□□□□ -0.71
VRK3-203ENST00000424804 RNF114Q9Y508 228 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 A0A1W2PQ09 198 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 OR4C45A6NMZ5 311 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 CCDC159P0C7I6 412 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 LIMS3P0CW19 117 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 LIMS4P0CW20 117 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 PGA5P0DJD9 388 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 PSG2P11465 335 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 AZGP1P25311 298 aaKnown RBP10.61□□□□□ -0.71
VRK3-203ENST00000424804 DCKP27707 260 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 CCR9P51686 369 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 ATP1B3P54709 279 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 IL18R1Q13478 541 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 MED21Q13503 144 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 DGUOKQ16854 277 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 OR2G6Q5TZ20 316 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 HCP5Q6MZN7 132 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 FDX2Q6P4F2 183 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 TMPRSS11AQ6ZMR5 421 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 ACP7Q6ZNF0 438 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 ZNF788Q6ZQV5 615 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 C17orf107Q6ZR85 190 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 Q6ZSR3 168 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 ZNRF1Q8ND25 227 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 OR5AK2Q8NH90 309 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 ANGPTL6Q8NI99 470 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 PP6455Q8WZ26 134 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 TMEM80Q96HE8 168 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 MED30Q96HR3 178 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 ELL3Q9HB65 397 aaPredicted RBP10.61□□□□□ -0.71
VRK3-203ENST00000424804 NEK6Q9HC98 313 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 MRPS18AQ9NVS2 196 aaKnown RBP10.61□□□□□ -0.71
VRK3-203ENST00000424804 ZNRD1Q9P1U0 126 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 DHDHQ9UQ10 334 aa10.61□□□□□ -0.71
VRK3-203ENST00000424804 IGKV1D-17A0A075B6S4 117 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 IGKV1-27A0A075B6S5 117 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 RFPL4AA6NLU0 287 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 RFPL4AL1F8VTS6 287 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 H0YAE9 185 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 XPNPEP2O43895 674 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 TSPAN9O75954 239 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 CYB5AP00167 134 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 ISG15P05161 165 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 CALCBP10092 127 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 ATF1P18846 271 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 SOX2P48431 317 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 RBP2P50120 134 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 SNU13P55769 128 aaKnown RBP10.6□□□□□ -0.71
VRK3-203ENST00000424804 MTCP1P56278 107 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 MRPL28Q13084 256 aaKnown RBP10.6□□□□□ -0.71
VRK3-203ENST00000424804 KLRD1Q13241 179 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 SLC25A26Q70HW3 274 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 AHSA2Q719I0 299 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 FAM185AQ8N0U4 392 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 PNKDQ8N490 385 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 STX19Q8N4C7 294 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 GGHQ92820 318 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 SPACA5Q96QH8 159 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 ZNF649Q9BS31 505 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 DNTTIP1Q9H147 329 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 MMP27Q9H306 513 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 RASL12Q9NYN1 266 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 CLEC2DQ9UHP7 191 aa10.6□□□□□ -0.71
VRK3-203ENST00000424804 CAB39Q9Y376 341 aaPredicted RBP10.6□□□□□ -0.71
VRK3-203ENST00000424804 EXOSC1Q9Y3B2 195 aaKnown RBP10.6□□□□□ -0.71
VRK3-203ENST00000424804 PNMA8CA0A1B0GUJ8 204 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 SLC1A7O00341 560 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 SIGLEC5O15389 551 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 ZFPL1O95159 310 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 TSPAN15O95858 294 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 HCKP08631 526 aa10.59□□□□□ -0.71
VRK3-203ENST00000424804 ACAA1P09110 424 aaPredicted RBP10.59□□□□□ -0.71
VRK3-203ENST00000424804 PRKACBP22694 351 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms