RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 OR10AC1Q8NH08 325 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 GATAD2BQ8WXI9 593 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 TFAP2CQ92754 450 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 GGHQ92820 318 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 SLAMF9Q96A28 289 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ZCCHC4Q9H5U6 513 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ZMAT3Q9HA38 289 aaKnown RBP9.04□□□□□ -0.96
USP49-204ENST00000423567 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 BABAM2Q9NXR7 383 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 CNOT2Q9NZN8 540 aaKnown RBP9.04□□□□□ -0.96
USP49-204ENST00000423567 NKX1-2Q9UD57 310 aaPredicted RBP9.04□□□□□ -0.96
USP49-204ENST00000423567 GLS2Q9UI32 602 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ZNF222Q9UK12 451 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 MAB21L2Q9Y586 359 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ARHGAP32A7KAX9 2087 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 IGKV1-27A0A075B6S5 117 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 IGKV1-9A0A0C4DH69 117 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 H0YJX3 145 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 MYL12BO14950 172 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 MAGEB3O15480 346 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 FCN3O75636 299 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 TFF1P04155 84 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 SFTPBP07988 381 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 HCKP08631 526 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 GTF2A1P52655 376 aaPredicted RBP9.03□□□□□ -0.96
USP49-204ENST00000423567 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 ACTG1P63261 375 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 BAMBIQ13145 260 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 CDK5R1Q15078 307 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 OR2G6Q5TZ20 316 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 FAM185AQ8N0U4 392 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 CD177Q8N6Q3 437 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 ASCC1Q8N9N2 400 aaKnown RBP9.03□□□□□ -0.96
USP49-204ENST00000423567 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 BPIFB6Q8NFQ5 453 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 OR52N1Q8NH53 320 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 TBC1D15Q8TC07 691 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 GPR148Q8TDV2 347 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 EMG1Q92979 244 aaKnown RBP9.03□□□□□ -0.96
USP49-204ENST00000423567 LHX4Q969G2 390 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 TBX15Q96SF7 602 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 SIRPDQ9H106 197 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 MTCH1Q9NZJ7 389 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 PCDHGB5Q9Y5G0 923 aa9.03□□□□□ -0.96
USP49-204ENST00000423567 CENPVL3A0A0U1RRI6 287 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 FAM181BA6NEQ2 426 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 SPRY1O43609 319 aaPredicted RBP9.02□□□□□ -0.97
USP49-204ENST00000423567 SULT1B1O43704 296 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 XPNPEP2O43895 674 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 ALX3O95076 343 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 MT-ND2P03891 347 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 CHRM2P08172 466 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 MMP9P14780 707 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 RAB3AP20336 220 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 EEF1B2P24534 225 aaKnown RBP9.02□□□□□ -0.97
USP49-204ENST00000423567 SOX2P48431 317 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 TAS2R43P59537 309 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 AHSA2Q719I0 299 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 VMO1Q7Z5L0 202 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 BCL6BQ8N143 479 aaPredicted RBP9.02□□□□□ -0.97
USP49-204ENST00000423567 FAM58AQ8N1B3 248 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 PARP16Q8N5Y8 322 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
USP49-204ENST00000423567 ZSCAN4Q8NAM6 433 aaPredicted RBP9.02□□□□□ -0.97
USP49-204ENST00000423567 FAM216AQ8WUB2 273 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 SMIM19Q96E16 107 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 FAM234AQ9H0X4 552 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 ELL3Q9HB65 397 aaPredicted RBP9.02□□□□□ -0.97
USP49-204ENST00000423567 PLCXD1Q9NUJ7 323 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 SCN3BQ9NY72 215 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 CLEC2DQ9UHP7 191 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 PSORS1C1Q9UIG5 152 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 ERGIC3Q9Y282 383 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 ZNF281Q9Y2X9 895 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 SVEP1Q4LDE5 3571 aa9.02□□□□□ -0.97
USP49-204ENST00000423567 IGHV1-69DA0A0B4J2H0 117 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 hCG_1809904A0A1W2PP81 198 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 A0A1W2PPE2 198 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 A0A1W2PR64 198 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 A0A1W2PRV1 198 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 COL6A5A8TX70 2615 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 M0R1W7 72 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 IGHV1-69P01742 117 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 TK1P04183 234 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 PRKACAP17612 351 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 BCL3P20749 454 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 PRTN3P24158 256 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 HSPA13P48723 471 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 AQP4P55087 323 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 RPL31P62899 125 aaKnown RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 UBA52P62987 128 aaKnown RBP9.01□□□□□ -0.97
USP49-204ENST00000423567 PPP3R1P63098 170 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 COL10A1Q03692 680 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 PDZK1IP1Q13113 114 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 SPIN3Q5JUX0 258 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 NCR3LG1Q68D85 454 aa9.01□□□□□ -0.97
USP49-204ENST00000423567 XAF1Q6GPH4 301 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms