RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ARL6IP1Q15041 203 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 ABCA11PQ4W5N1 156 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 Q6ZSR3 168 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 FBXL14Q8N1E6 418 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 IFI44Q8TCB0 444 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 BORCS8Q96FH0 119 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 NECAP2Q9NVZ3 263 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 KLF2Q9Y5W3 355 aaPredicted RBP13.72□□□□□ -0.21
CDH1-202ENST00000422392 DOCK10Q96BY6 2186 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 LOC102723996A0A087X1L8 192 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 C1QL1O75973 258 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 ASCL1P50553 236 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 PPT1P50897 306 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 F2RL1P55085 397 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 EIF5AP63241 154 aaKnown RBP13.71□□□□□ -0.21
CDH1-202ENST00000422392 MRPS34P82930 218 aaKnown RBP13.71□□□□□ -0.21
CDH1-202ENST00000422392 EIF3IQ13347 325 aaKnown RBP13.71□□□□□ -0.21
CDH1-202ENST00000422392 TMEM187Q14656 261 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 FAM76BQ5HYJ3 339 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 Q6ZPA2 131 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 OR52M1Q8NGK5 317 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 WFDC1Q9HC57 220 aa13.71□□□□□ -0.21
CDH1-202ENST00000422392 FAM157AC9JC47 383 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 CA11O75493 328 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 JTBO76095 146 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 CHATP28329 748 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 RBP2P50120 134 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 SWI5Q1ZZU3 235 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 RPS19BP1Q86WX3 136 aaKnown RBP13.71□□□□□ -0.22
CDH1-202ENST00000422392 KIRREL1Q96J84 757 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 DECR2Q9NUI1 292 aa13.71□□□□□ -0.22
CDH1-202ENST00000422392 A0A1B0GV50 99 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 APOC1P02654 83 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 HTR5AP47898 357 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 RAC1P63000 192 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 ZNF616Q08AN1 781 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 PPA1Q15181 289 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 RAB35Q15286 201 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 SHEQ5VZ18 495 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 RTL6Q6ICC9 239 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 OR1F12Q8NHA8 337 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 GLYATL2Q8WU03 294 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 NAA60Q9H7X0 242 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 PARP11Q9NR21 331 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 SLC2A9Q9NRM0 540 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 ZNF98A6NK75 572 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 F10P00742 488 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 NRASP01111 189 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 KLK3P07288 261 aaPredicted RBP13.7□□□□□ -0.22
CDH1-202ENST00000422392 ECI1P42126 302 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 SPSB1Q96BD6 273 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 C10orf35Q96D05 121 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 SH3BGRL3Q9H299 93 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 WDR54Q9H977 334 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 ZDHHC8Q9ULC8 765 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 ST3GAL6Q9Y274 331 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 KCNIP3Q9Y2W7 256 aa13.7□□□□□ -0.22
CDH1-202ENST00000422392 IGHV3-9P01782 118 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 RFPL3SP0C7P2 107 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 FGF5P12034 268 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 RGS19P49795 217 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 SUCLG1P53597 346 aaKnown RBP13.69□□□□□ -0.22
CDH1-202ENST00000422392 ZNF92Q03936 586 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 PEA15Q15121 130 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 TGIF1Q15583 401 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 MIDNQ504T8 468 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 AVPI1Q5T686 147 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 GPR137CQ8N3F9 429 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 TMEM38BQ9NVV0 291 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 WNT16Q9UBV4 365 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 RPS18P62269 152 aaKnown RBP13.69□□□□□ -0.22
CDH1-202ENST00000422392 PSG4Q00888 419 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 NHLH2Q02577 135 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 CNN3Q15417 329 aaKnown RBP13.69□□□□□ -0.22
CDH1-202ENST00000422392 OR14L1PQ8NHC6 308 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 PIGCQ92535 297 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 ZNF700Q9H0M5 742 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 SH2D2AQ9NP31 389 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 EDARQ9UNE0 448 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 RFNGQ9Y644 331 aa13.69□□□□□ -0.22
CDH1-202ENST00000422392 DNAJC13O75165 2243 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 COLCA2A8K830 154 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 ZNF587BE7ETH6 402 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 CXCL13O43927 109 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 GAPDHP04406 335 aaKnown RBP13.68□□□□□ -0.22
CDH1-202ENST00000422392 CFIP05156 583 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 DVL1P1P54792 670 aaPredicted RBP13.68□□□□□ -0.22
CDH1-202ENST00000422392 MEX3BQ6ZN04 569 aaKnown RBP13.68□□□□□ -0.22
CDH1-202ENST00000422392 CALHM1Q8IU99 346 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 CLCC1Q96S66 551 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 GPHA2Q96T91 129 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 C12orf57Q99622 126 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 C20orf24Q9BUV8 137 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 P4HTMQ9NXG6 502 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 HSF4Q9ULV5 492 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 NSG1A0A0A6YYJ2 146 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 CBR3O75828 277 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 TSPAN15O95858 294 aa13.68□□□□□ -0.22
CDH1-202ENST00000422392 B3GALT5-AS1P59052 145 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms