RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PDLIM4P50479 330 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 SNTB1Q13884 538 aaKnown RBP9.44□□□□□ -0.9
PTCH1-206ENST00000421141 IL36GQ9NZH8 169 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 EPHA2P29317 976 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 SSX2Q16385 188 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 SUMF2Q8NBJ7 301 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 SLC7A6Q92536 515 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 SUCNR1Q9BXA5 334 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 MSL2Q9HCI7 577 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 ARPC4-TTLL3A0A0A6YYG9 625 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 ERGIC1Q969X5 290 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 CADP27708 2225 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 CHATP28329 748 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 CCR6P51684 374 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 Q56UQ5 140 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 C20orf196Q8IYI0 205 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 OR5A2Q8NGI9 324 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 OR8U1Q8NH10 309 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 OR2T6Q8NHC8 308 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 POC1BQ8TC44 478 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 TINAGQ9UJW2 476 aa9.44□□□□□ -0.9
PTCH1-206ENST00000421141 CDIPTO14735 213 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ZFPL1O95159 310 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ARG1P05089 322 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 SPANXN5Q5MJ07 72 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 TCRBP04435 133 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 TAS2R45P59539 299 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 TESK1Q15569 626 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 MPPED2Q15777 294 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ELP2Q6IA86 826 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 NUDCD2Q8WVJ2 157 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ZNF385AQ96PM9 386 aaKnown RBP9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PCGF1Q9BSM1 259 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 STRAPQ9Y3F4 350 aaKnown RBP9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PPIAL4EA0A075B759 164 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PPIAL4DF5H284 164 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 GPR31O00270 319 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ST8SIA3O43173 380 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 EFEMP2O95967 443 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 CLEC2LP0C7M8 214 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PPIAL4FP0DN26 164 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 FAM57AQ8TBR7 257 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 SEC22AQ96IW7 307 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ARPC5LQ9BPX5 153 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PPIAL4AQ9Y536 164 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ETFDHQ16134 617 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 FAM27BQ5VT28 67 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ADTRPQ96IZ2 230 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 GP6Q9HCN6 339 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 A0A1W2PN81 502 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 DEFB108AA8MXU0 73 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 FBXO24O75426 580 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 CHRNA7P36544 502 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 GFRA1P56159 465 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 DUSP21Q9H596 190 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 INSIG2Q9Y5U4 225 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 H3BMH7 237 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ZNF205O95201 554 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 ERVFRD-1P60508 538 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 C17orf107Q6ZR85 190 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 OR10P1Q8NGE3 313 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 OR14K1Q8NGZ2 314 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 MRGPRDQ8TDS7 321 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PRSS50Q9UI38 385 aa9.43□□□□□ -0.9
PTCH1-206ENST00000421141 PDCD6O75340 191 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 FGF2P09038 288 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 ZFP36L1Q07352 338 aaKnown RBP9.42□□□□□ -0.9
PTCH1-206ENST00000421141 OR10K2Q6IF99 312 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 OR4S1Q8NGB4 309 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 PKDREJQ9NTG1 2253 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 UPK3AO75631 287 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 NPBWR1P48145 328 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 SORDQ00796 357 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 LY6DQ14210 128 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 ZNF658BQ4V348 819 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-206ENST00000421141 TMEM268Q5VZI3 342 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 DEDD2Q8WXF8 326 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 KMT2EQ8IZD2 1858 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 A0A1W2PNV4 684 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 NEIL1Q96FI4 390 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-206ENST00000421141 PSG11Q9UQ72 335 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 GMDSO60547 372 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 HPNP05981 417 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 OR5G3P0C626 314 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 ARV1Q9H2C2 271 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 CTSBP07858 339 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 CCL8P80075 99 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 DERL3Q96Q80 235 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 OR2D2Q9H210 308 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 COL19A1Q14993 1142 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 DGAT2L6Q6ZPD8 337 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 OR1K1Q8NGR3 316 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 ADAMTS17Q8TE56 1095 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 SIGLEC12Q96PQ1 595 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 CHODLQ9H9P2 273 aa9.42□□□□□ -0.9
PTCH1-206ENST00000421141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.91e-6■■■■□ 23.7
PTCH1-206ENST00000421141 C9orf172C9J069 976 aa9.41□□□□□ -0.9
PTCH1-206ENST00000421141 ZBTB37Q5TC79 503 aa9.41□□□□□ -0.9
PTCH1-206ENST00000421141 DOLPP1Q86YN1 238 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms