RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TMEM212A6NML5 194 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 M0R1W7 72 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 ALX3O95076 343 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 SERPINA3P01011 423 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 TK1P04183 234 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 RBP2P50120 134 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 GABPB1Q06547 395 aaPredicted RBP16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 ZNF676Q8N7Q3 588 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 OR13C3Q8NGS6 347 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 OR13C9Q8NGT0 318 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 OR5AK2Q8NH90 309 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 GATAD2BQ8WXI9 593 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 TFAP2CQ92754 450 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 SPSB1Q96BD6 273 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 MRPL48Q96GC5 212 aaKnown RBP16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 AJUBAQ96IF1 538 aa16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 RBFOX1Q9NWB1 397 aaKnown RBP16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 CAB39Q9Y376 341 aaPredicted RBP16.89■□□□□ 0.29
PKNOX1-202ENST00000418336 A0A0U1RQK1 487 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 TMEM82A0PJX8 343 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 K7N7A8 449 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 HOXA3O43365 443 aaPredicted RBP16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 ZNF20P17024 532 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 BCL3P20749 454 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 PRKACBP22694 351 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 ATP1B3P54709 279 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 COL10A1Q03692 680 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 PDZK1IP1Q13113 114 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 KLRD1Q13241 179 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 CDK5R1Q15078 307 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 TMEM200BQ69YZ2 307 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 LHFPL2Q6ZUX7 228 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 TCF23Q7RTU1 214 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 PDZD9Q8IXQ8 264 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 SETD9Q8NE22 299 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 TAF15Q92804 592 aaKnown RBP eCLIP16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 OPALINQ96PE5 141 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 FAM234AQ9H0X4 552 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 DCLRE1BQ9H816 532 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 ZMAT3Q9HA38 289 aaKnown RBP16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 FKBP14Q9NWM8 211 aa16.88■□□□□ 0.29
PKNOX1-202ENST00000418336 TRBV2A0A0J9YWF9 115 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 OGG1O15527 345 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 MELTFP08582 738 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 CCDC159P0C7I6 412 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 HKR1P10072 659 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 PIPP12273 146 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 GBX2P52951 348 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 DLX6P56179 175 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 ZP1P60852 638 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 CCDC58Q4VC31 144 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 RPL22L1Q6P5R6 122 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 RBMS3Q6XE24 437 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 C17orf107Q6ZR85 190 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 HAVCR2Q8TDQ0 301 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 MYCBPQ99417 103 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 ZCCHC4Q9H5U6 513 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 NOX4Q9NPH5 578 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 PLCXD1Q9NUJ7 323 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 OR14J1Q9UGF5 321 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 TRRAPQ9Y4A5 3859 aa16.87■□□□□ 0.29
PKNOX1-202ENST00000418336 SPRY1O43609 319 aaPredicted RBP16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 XPNPEP2O43895 674 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 KDM4BO94953 1096 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 INMTO95050 263 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 MTCP1P56278 107 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 SLC34A1Q06495 639 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 ZNF273Q14593 569 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 ZNF146Q15072 292 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 LDLRAD3Q86YD5 345 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 PNKDQ8N490 385 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 TMEM80Q96HE8 168 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 BABAM2Q9NXR7 383 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 PSORS1C1Q9UIG5 152 aa16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 EXOSC1Q9Y3B2 195 aaKnown RBP16.86■□□□□ 0.29
PKNOX1-202ENST00000418336 IRGMA1A4Y4 181 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 SLC1A7O00341 560 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 ANGPTL7O43827 346 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 PSPNO60542 156 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 ERVFRD-1P60508 538 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 RPS11P62280 158 aaKnown RBP eCLIP16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 ACTG1P63261 375 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 DMKNQ6E0U4 476 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 CMTM4Q8IZR5 234 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 C8orf59Q8N0T1 100 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 OR4M1Q8NGD0 313 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 OR52N4Q8NGI2 321 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 OR52N1Q8NH53 320 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 RFT1Q96AA3 541 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 PGLYRP3Q96LB9 341 aa16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 METTL8Q9H825 291 aaKnown RBP16.85■□□□□ 0.29
PKNOX1-202ENST00000418336 SULT1B1O43704 296 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 CHRM2P08172 466 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 CALCBP10092 127 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 POU3F4P49335 361 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 RPL31P62899 125 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 ST3GAL4Q11206 333 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 SERPINA12Q8IW75 414 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 MKXQ8IYA7 352 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms