RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 LINC01560Q8TB33 94 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 GHSRQ92847 366 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 UFD1Q92890 307 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 PIGTQ969N2 578 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 ZNF479Q96JC4 524 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 C4orf45Q96LM5 186 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 MED18Q9BUE0 208 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 PBOV1Q9GZY1 135 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 PPIL3Q9H2H8 161 aaKnown RBP4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 MMP27Q9H306 513 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 KCNK15Q9H427 330 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 CDH20Q9HBT6 801 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 CHMP1AQ9HD42 196 aaPredicted RBP4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 NGBQ9NPG2 151 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 NPAP1Q9NZP6 1156 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 NUFIP1Q9UHK0 495 aaKnown RBP4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 OR52A1Q9UKL2 312 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 KCNS2Q9ULS6 477 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 SLC22A13Q9Y226 551 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 N6AMT1Q9Y5N5 214 aa4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 SPTBN1Q01082 2364 aaKnown RBP4.98□□□□□ -1.61
NIFKP3-201ENST00000417799 PRR14LQ5THK1 2151 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 IGHV2OR16-5A0A0B4J2B6 119 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 A0A0U1RQV5 110 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PNMA8CA0A1B0GUJ8 204 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 TUBAL3A6NHL2 446 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 TMEM212A6NML5 194 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 J3QKU1 62 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 M0R1B8 84 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 CCRL2O00421 344 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 GPRIN2O60269 458 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 TTRP02766 147 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 VPREB1P12018 145 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ZNF35P13682 527 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PLA2G2AP14555 144 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 CD36P16671 472 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ANOS1P23352 680 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PTAFRP25105 342 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 CALCRP30988 508 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 TGFBR2P37173 567 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PEX19P40855 299 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 WNT5AP41221 380 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PDLIM4P50479 330 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 NAAAQ02083 359 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 SLC3A1Q07837 685 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 UBE2V1Q13404 147 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 SNTB1Q13884 538 aaKnown RBP4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 TRAM1Q15629 374 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 SSX1Q16384 188 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ODF4Q2M2E3 257 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 TMEM244Q5VVB8 128 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ARL9Q6T311 187 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ZNF704Q6ZNC4 412 aaPredicted RBP4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 MYPOPQ86VE0 399 aaPredicted RBP4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 SATL1Q86VE3 508 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 RDH10Q8IZV5 341 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 C1orf87Q8N0U7 546 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 MS4A15Q8N5U1 240 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ZNF676Q8N7Q3 588 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 OR8B12Q8NGG6 310 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 OR52H1Q8NGJ2 320 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 OR5AK2Q8NH90 309 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 RPS4Y2Q8TD47 263 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 APOBEC3DQ96AK3 386 aaPredicted RBP4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 SGK3Q96BR1 496 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 SMIM19Q96E16 107 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 YIPF6Q96EC8 236 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PGLYRP3Q96LB9 341 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 PDCD1LG2Q9BQ51 273 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 COMMD4Q9H0A8 199 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 RGCCQ9H4X1 137 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 MOB1AQ9H8S9 216 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 NDUFB11Q9NX14 153 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 ZNF319Q9P2F9 582 aa4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 EIF3KQ9UBQ5 218 aaKnown RBP4.97□□□□□ -1.61
NIFKP3-201ENST00000417799 MYO18BQ8IUG5 2567 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 A0A1B0GTI1 187 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 LOC107986453A0A1B0GWG9 222 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 A0A1W2PP11 408 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 C5orf63A6NC05 138 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 DPRXA6NFQ7 191 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 H3BSA7 217 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 P2RY10O00398 339 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 UBE2CO00762 179 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 CASKO14936 926 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 XRCC2O43543 280 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 NGFP01138 241 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 CRYAAP02489 173 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 HLA-DPB1P04440 258 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 ISG15P05161 165 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 UBCP0CG48 685 aaKnown RBP4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 MYOD1P15172 320 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 ACHEP22303 614 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 CCL1P22362 96 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 TUBG1P23258 451 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 GADD45AP24522 165 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 PSMA1P25786 263 aaKnown RBP4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 GABRA5P31644 462 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 CRYBB2P43320 205 aa4.96□□□□□ -1.62
NIFKP3-201ENST00000417799 UCP2P55851 309 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms