RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CFHR2P36980 270 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 RPS19P39019 145 aaKnown RBP7.11□□□□□ -1.27
TRIM48-201ENST00000417545 PMELP40967 661 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 NPBWR2P48146 333 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 RORCP51449 518 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 IKZF1Q13422 519 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 ZMYND11Q15326 602 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 FAM189A2Q15884 450 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 CTF1Q16619 201 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 SPIN3Q5JUX0 258 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 C1orf100Q5SVJ3 147 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 FAM201AQ5SY85 155 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 MZT2AQ6P582 158 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 PRSS57Q6UWY2 283 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 ACP7Q6ZNF0 438 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 RNF144BQ7Z419 303 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 FAM90A1Q86YD7 464 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 C11orf53Q8IXP5 236 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 ASCC1Q8N9N2 400 aaKnown RBP7.11□□□□□ -1.27
TRIM48-201ENST00000417545 OR51D1Q8NGF3 324 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 OR5T2Q8NGG2 359 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 OR8B3Q8NGG8 313 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 OR51T1Q8NGJ9 327 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 KCNG3Q8TAE7 436 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 PPP1R35Q8TAP8 253 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 NEK7Q8TDX7 302 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 C10orf105Q8TEF2 133 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 FAM3DQ96BQ1 224 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 OR8B2Q96RD0 313 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 NRIP2Q9BQI9 281 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 SELENOIQ9C0D9 397 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 WDR13Q9H1Z4 485 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 BANF2Q9H503 90 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 LIN7BQ9HAP6 207 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 MTCH1Q9NZJ7 389 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 MIOXQ9UGB7 285 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 CEPT1Q9Y6K0 416 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
TRIM48-201ENST00000417545 ANKRD17O75179 2603 aaKnown RBP7.11□□□□□ -1.27
TRIM48-201ENST00000417545 IGHV4-30-2A0A087WSY4 118 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 DPPA5A6NC42 116 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 METTL21EPA6NDL7 271 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 H3BUI4 141 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 SIRPB1O00241 398 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 TMPRSS2O15393 492 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NOS1APO75052 506 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 OR7C1O76099 320 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 KNG1P01042 644 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 IGHV2-70P01814 119 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ACAA1P09110 424 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 SLC2A2P11168 524 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 CPT2P23786 658 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 GABRR1P24046 479 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 GIFP27352 417 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NR4A2P43354 598 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 FGF12P61328 243 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 SPCS2Q15005 226 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF404Q494X3 552 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM155Q4W5P6 130 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ESCO2Q56NI9 601 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ATAD3CQ5T2N8 411 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 DCDC5Q6ZRR9 648 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 OR2W3Q7Z3T1 314 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 LINC00596Q86U02 117 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM185AQ8NFB2 350 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 SLC25A46Q96AG3 418 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 MRPS24Q96EL2 167 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 MED30Q96HR3 178 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 GFI1Q99684 422 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 DCUN1D5Q9BTE7 237 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF665Q9H7R5 613 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 HMG20AQ9NP66 347 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 IL36GQ9NZH8 169 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ST3GAL6Q9Y274 331 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 USF3Q68DE3 2245 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 RFPL4AA6NLU0 287 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 FAM25AB3EWG3 89 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 FAM25CB3EWG5 89 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 FAM25GB3EWG6 89 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 RFPL4AL1F8VTS6 287 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF701M0R085 212 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 DEGS1O15121 323 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 RGS5O15539 181 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NDUFB3O43676 98 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM127O75204 238 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 HAND1O96004 215 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 LHBP01229 141 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 IGKV1D-12P01611 117 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 SFTPBP07988 381 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 CHRM2P08172 466 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 SNRPBP14678 240 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF182P17025 639 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 NDUFB7P17568 137 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 USF1P22415 310 aaPredicted RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 DUSP1P28562 367 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 PRDX2P32119 198 aa7.1□□□□□ -1.27
TRIM48-201ENST00000417545 RBMXP38159 391 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 RBM11P57052 281 aaKnown RBP7.1□□□□□ -1.27
TRIM48-201ENST00000417545 GNB2P62879 340 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms