RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ABCB9Q9NP78 766 aa14.81□□□□□ -0.04
VCP-202ENST00000417448 DUX4Q9UBX2 424 aa14.81□□□□□ -0.04
VCP-202ENST00000417448 ERGIC3Q9Y282 383 aa14.81□□□□□ -0.04
VCP-202ENST00000417448 IGHV2-70DA0A0C4DH43 119 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 OOEPA6NGQ2 149 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 OR5B21A6NL26 309 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 RGS10O43665 173 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 MELTFP08582 738 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 WNT2P09544 360 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 VSIG8P0DPA2 414 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 RPS2P15880 293 aaKnown RBP14.8□□□□□ -0.04
VCP-202ENST00000417448 ATF1P18846 271 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 MRPL28Q13084 256 aaKnown RBP14.8□□□□□ -0.04
VCP-202ENST00000417448 IRF3Q14653 427 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 FAM189A2Q15884 450 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 DMKNQ6E0U4 476 aaPredicted RBP14.8□□□□□ -0.04
VCP-202ENST00000417448 RPS4Y2Q8TD47 263 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 CHST5Q9GZS9 411 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 TRIM36Q9NQ86 728 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.8□□□□□ -0.04
VCP-202ENST00000417448 SLC7A11Q9UPY5 501 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 DHDHQ9UQ10 334 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 NOTCH3Q9UM47 2321 aa14.8□□□□□ -0.04
VCP-202ENST00000417448 A0A1W2PPK0 400 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 DENRO43583 198 aaKnown RBP14.79□□□□□ -0.04
VCP-202ENST00000417448 SERPINA3P01011 423 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 RPSAP08865 295 aaKnown RBP14.79□□□□□ -0.04
VCP-202ENST00000417448 CALCBP10092 127 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 CELP19835 753 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 EEF1B2P24534 225 aaKnown RBP14.79□□□□□ -0.04
VCP-202ENST00000417448 MED22Q15528 200 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 C2orf68Q2NKX9 166 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 CCDC58Q4VC31 144 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 RUSC1-AS1Q66K80 236 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 BTNL3Q6UXE8 466 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 EGFL6Q8IUX8 553 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 MUC20Q8N307 709 aaPredicted RBP14.79□□□□□ -0.04
VCP-202ENST00000417448 TMEM86BQ8N661 226 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 CCDC54Q8NEL0 328 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 SMIM19Q96E16 107 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 CCL13Q99616 98 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 SSBP3Q9BWW4 388 aaPredicted RBP14.79□□□□□ -0.04
VCP-202ENST00000417448 CDCA4Q9BXL8 241 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 NOX4Q9NPH5 578 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 CTSZQ9UBR2 303 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 LRCH1Q9Y2L9 728 aa14.79□□□□□ -0.04
VCP-202ENST00000417448 LSM2Q9Y333 95 aaKnown RBP14.79□□□□□ -0.04
VCP-202ENST00000417448 F8VVB4 439 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 F8VWA3 439 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 TNFRSF13BO14836 293 aaPredicted RBP14.78□□□□□ -0.04
VCP-202ENST00000417448 ADAM20O43506 726 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 FCN3O75636 299 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 GATBO75879 557 aaKnown RBP14.78□□□□□ -0.04
VCP-202ENST00000417448 SELLP14151 372 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 AZGP1P25311 298 aaKnown RBP14.78□□□□□ -0.04
VCP-202ENST00000417448 RBM48Q5RL73 367 aaKnown RBP14.78□□□□□ -0.04
VCP-202ENST00000417448 MRAPQ8TCY5 172 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 RAB40AQ8WXH6 277 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 PP6455Q8WZ26 134 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 ITFG2Q969R8 447 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 SLAMF9Q96A28 289 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 PGLYRP3Q96LB9 341 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 MND1Q9BWT6 205 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 ZCCHC4Q9H5U6 513 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 TAS2R4Q9NYW5 299 aa14.78□□□□□ -0.04
VCP-202ENST00000417448 J3QT63 122 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 AMY2BP19961 511 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 GLRA1P23415 457 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 POU3F4P49335 361 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 FUT6P51993 359 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 RPS11P62280 158 aaKnown RBP eCLIP14.77□□□□□ -0.05
VCP-202ENST00000417448 INSL4Q14641 139 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 REC114Q7Z4M0 266 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 ZNF573Q86YE8 665 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 OR51A2Q8NGJ7 313 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 OR5D18Q8NGL1 313 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 OR10Z1Q8NGY1 313 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 GPR148Q8TDV2 347 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 BORCS8Q96FH0 119 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 NEIL1Q96FI4 390 aaPredicted RBP14.77□□□□□ -0.05
VCP-202ENST00000417448 Q9H521 79 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 SMURF1Q9HCE7 757 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 DNAJB11Q9UBS4 358 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 POMT1Q9Y6A1 747 aa14.77□□□□□ -0.05
VCP-202ENST00000417448 TRAV38-1A0A0B4J264 116 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 GPR137BO60478 399 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 CSF1P09603 554 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 OCM2P0CE71 109 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 HSMCR30P0CW71 290 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 CFHR2P36980 270 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 CEBPDP49716 269 aaPredicted RBP14.76□□□□□ -0.05
VCP-202ENST00000417448 MTCP1P56278 107 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 RPL15P61313 204 aaKnown RBP14.76□□□□□ -0.05
VCP-202ENST00000417448 CNN3Q15417 329 aaKnown RBP14.76□□□□□ -0.05
VCP-202ENST00000417448 SPHARQ15513 63 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 RNLSQ5VYX0 342 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 TEX36Q5VZQ5 186 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 CRIP3Q6Q6R5 217 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 ZNF841Q6ZN19 808 aa14.76□□□□□ -0.05
VCP-202ENST00000417448 DCDC5Q6ZRR9 648 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms