RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 FBP1P09467 338 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 PRKACBP22694 351 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 OMGP23515 440 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 AZGP1P25311 298 aaKnown RBP12.79□□□□□ -0.36
ITGB1-204ENST00000417122 IER3P46695 156 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 COL10A1Q03692 680 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 LPCAT4Q643R3 524 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 TMEM200BQ69YZ2 307 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 LHFPL2Q6ZUX7 228 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 PNKDQ8N490 385 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 ASCC1Q8N9N2 400 aaKnown RBP12.79□□□□□ -0.36
ITGB1-204ENST00000417122 OR4M1Q8NGD0 313 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 OR51A4Q8NGJ6 313 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 OR52I1Q8NGK6 324 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 DPAGT1Q9H3H5 408 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 K7N7A8 449 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 CYB5AP00167 134 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 OCM2P0CE71 109 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 OCMP0CE72 109 aaPredicted RBP12.78□□□□□ -0.36
ITGB1-204ENST00000417122 MDKP21741 143 aaPredicted RBP12.78□□□□□ -0.36
ITGB1-204ENST00000417122 POU3F4P49335 361 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 MTCP1P56278 107 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 MRPL28Q13084 256 aaKnown RBP12.78□□□□□ -0.36
ITGB1-204ENST00000417122 SMN1Q16637 294 aaKnown RBP12.78□□□□□ -0.36
ITGB1-204ENST00000417122 LRRC36Q1X8D7 754 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 MKXQ8IYA7 352 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 Q8IYB0 196 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 DYRK2Q92630 601 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 EMG1Q92979 244 aaKnown RBP12.78□□□□□ -0.36
ITGB1-204ENST00000417122 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 OPALINQ96PE5 141 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 ZNRD1Q9P1U0 126 aa12.78□□□□□ -0.36
ITGB1-204ENST00000417122 SF3B6Q9Y3B4 125 aaKnown RBP12.78□□□□□ -0.36
ITGB1-204ENST00000417122 TMEM212A6NML5 194 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 E9PI62 339 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 ANGPTL7O43827 346 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 WBP4O75554 376 aaKnown RBP12.77□□□□□ -0.37
ITGB1-204ENST00000417122 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
ITGB1-204ENST00000417122 SAA4P35542 130 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 NPBWR2P48146 333 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 GBX2P52951 348 aaPredicted RBP12.77□□□□□ -0.37
ITGB1-204ENST00000417122 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.37
ITGB1-204ENST00000417122 ACSM1Q08AH1 577 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF691Q5VV52 312 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 HCP5Q6MZN7 132 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 OR13C9Q8NGT0 318 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 COMMD4Q9H0A8 199 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 FGF20Q9NP95 211 aaPredicted RBP12.77□□□□□ -0.37
ITGB1-204ENST00000417122 RBFOX1Q9NWB1 397 aaKnown RBP12.77□□□□□ -0.37
ITGB1-204ENST00000417122 C1RLQ9NZP8 487 aa12.77□□□□□ -0.37
ITGB1-204ENST00000417122 TRBV2A0A0J9YWF9 115 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 hCG_1809904A0A1W2PP81 198 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 A0A1W2PPE2 198 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 A0A1W2PR64 198 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 A0A1W2PRV1 198 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 SPRY1O43609 319 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF737O75373 536 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 ZFPL1O95159 310 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 CLIC3O95833 236 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 PAHP00439 452 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 MT-ND2P03891 347 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 PIPP12273 146 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-204ENST00000417122 CCL3L1P16619 93 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 BCL3P20749 454 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 RAG2P55895 527 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 PDZK1IP1Q13113 114 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 ZNF273Q14593 569 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 RCN1Q15293 331 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 TTC23Q5W5X9 447 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 GDPD3Q7L5L3 318 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 FAM58AQ8N1B3 248 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 OR4F5Q8NH21 305 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 OR5AK2Q8NH90 309 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 CNIH3Q8TBE1 160 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 CYGBQ8WWM9 190 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 RFT1Q96AA3 541 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 SNX22Q96L94 193 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 PDCD1LG2Q9BQ51 273 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 ZCCHC4Q9H5U6 513 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 HEXA-AS1Q9H8Q6 139 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 SEBOXQ9HB31 216 aaPredicted RBP12.76□□□□□ -0.37
ITGB1-204ENST00000417122 NEK6Q9HC98 313 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 C8orf4Q9NR00 106 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 IL36RNQ9UBH0 155 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
ITGB1-204ENST00000417122 A0A1B0GUS0 222 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 GPR137BO60478 399 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 NDUFA7O95182 113 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 HAND1O96004 215 aa12.75□□□□□ -0.37
ITGB1-204ENST00000417122 LIMS3P0CW19 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms