RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 BLMHQ13867 455 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 LY6EQ16553 131 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 MIDNQ504T8 468 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 SLC25A26Q70HW3 274 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 LHFPL4Q7Z7J7 247 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 OR51A4Q8NGJ6 313 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 RNFT2Q96EX2 444 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 CEP19Q96LK0 163 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 SSX3Q99909 188 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 PPA2Q9H2U2 334 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 C16orf95Q9H693 158 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 RBFOX1Q9NWB1 397 aaKnown RBP12.26□□□□□ -0.45
UBXN4-203ENST00000416538 SIGLEC9Q9Y336 463 aa12.26□□□□□ -0.45
UBXN4-203ENST00000416538 SF3B6Q9Y3B4 125 aaKnown RBP12.26□□□□□ -0.45
UBXN4-203ENST00000416538 PRKDCP78527 4128 aaKnown RBP12.26□□□□□ -0.45
UBXN4-203ENST00000416538 UBCP0CG48 685 aaKnown RBP12.25□□□□□ -0.45
UBXN4-203ENST00000416538 NPBWR2P48146 333 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 FAM220AQ7Z4H9 259 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 CBR4Q8N4T8 237 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 ASCC1Q8N9N2 400 aaKnown RBP12.25□□□□□ -0.45
UBXN4-203ENST00000416538 OR5R1Q8NH85 324 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 PIFOQ8TCI5 191 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 RFKQ969G6 155 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 FAM234AQ9H0X4 552 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 IMPAD1Q9NX62 359 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 FRRS1LQ9P0K9 344 aa12.25□□□□□ -0.45
UBXN4-203ENST00000416538 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 ODF3BA8MYP8 253 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 SLC16A6O15403 523 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 GATBO75879 557 aaKnown RBP12.24□□□□□ -0.45
UBXN4-203ENST00000416538 CALCBP10092 127 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 BCL3P20749 454 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 ATP6V1E1P36543 226 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 POU3F4P49335 361 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 ALDH3A2P51648 485 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 SNRPGP62308 76 aaKnown RBP12.24□□□□□ -0.45
UBXN4-203ENST00000416538 ZNF91Q05481 1191 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 SLC25A30Q5SVS4 291 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 SLC35E4Q6ICL7 350 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 FDX2Q6P4F2 183 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 TPRX1Q8N7U7 411 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 OR52N4Q8NGI2 321 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 LGALS12Q96DT0 336 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 PELI1Q96FA3 418 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 ZNF649Q9BS31 505 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 MEGF9Q9H1U4 602 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBXN4-203ENST00000416538 SLC7A11Q9UPY5 501 aa12.24□□□□□ -0.45
UBXN4-203ENST00000416538 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 IGKV1-12A0A0C4DH73 117 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 FAM90A8PA6NJQ4 464 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 OR4C45A6NMZ5 311 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 PSPNO60542 156 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 IGKV1D-12P01611 117 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 JUNBP17275 347 aaPredicted RBP12.23□□□□□ -0.45
UBXN4-203ENST00000416538 AZGP1P25311 298 aaKnown RBP12.23□□□□□ -0.45
UBXN4-203ENST00000416538 DUSP1P28562 367 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 TGFBR2P37173 567 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 FUT6P51993 359 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 OCLNQ16625 522 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 ENTHD1Q8IYW4 607 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 OR8H2Q8N162 312 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 TRUB1Q8WWH5 349 aaKnown RBP12.23□□□□□ -0.45
UBXN4-203ENST00000416538 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
UBXN4-203ENST00000416538 RFT1Q96AA3 541 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 BORCS8Q96FH0 119 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 C4orf36Q96KX1 117 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 SPACA5Q96QH8 159 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 SLC29A1Q99808 456 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 CHST6Q9GZX3 395 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 MYRFQ9Y2G1 1151 aa12.23□□□□□ -0.45
UBXN4-203ENST00000416538 TRBV2A0A0J9YWF9 115 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 HAND1O96004 215 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 ISG15P05161 165 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 ATF1P18846 271 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 EFNB2P52799 333 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 SNU13P55769 128 aaKnown RBP12.22□□□□□ -0.45
UBXN4-203ENST00000416538 EDDM3BP56851 147 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 ACTC1P68032 377 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 ACTA1P68133 377 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 DEFA6Q01524 100 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 CNN3Q15417 329 aaKnown RBP12.22□□□□□ -0.45
UBXN4-203ENST00000416538 PLA1AQ53H76 456 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 UTS2BQ765I0 119 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 OR4S1Q8NGB4 309 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 PP6455Q8WZ26 134 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 FGGYQ96C11 551 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 C10orf35Q96D05 121 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 TCF7L1Q9HCS4 588 aa12.22□□□□□ -0.45
UBXN4-203ENST00000416538 EXOGQ9Y2C4 368 aaKnown RBP12.22□□□□□ -0.45
UBXN4-203ENST00000416538 DAPL1A0PJW8 107 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 E9PI62 339 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 MMP23AO75900 390 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 CHRM2P08172 466 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 ZNF728P0DKX0 622 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 IGHV1-8P0DP01 117 aa12.21□□□□□ -0.45
UBXN4-203ENST00000416538 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms