RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 EXTL1Q92935 676 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 SIT1Q9Y3P8 196 aa11.47□□□□□ -0.57
SCN1B-202ENST00000415950 ABCA7Q8IZY2 2146 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 CRYM-AS1A6NIL9 109 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 SH2D1BO14796 132 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 CRHP06850 196 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 CD63P08962 238 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 CT45A10P0DMU9 189 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 TMEM267Q0VDI3 215 aaPredicted RBP11.46□□□□□ -0.57
SCN1B-202ENST00000415950 ANKRD33Q7Z3H0 272 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 S100A7AQ86SG5 101 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 DTWD2Q8NBA8 298 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 FREM3P0C091 2139 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 KLRC4-KLRK1H3BQV0 150 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 TNFSF11O14788 317 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 LINC01565O15544 149 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 MBTPS2O43462 519 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 THY1P04216 161 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 GP1BAP07359 652 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 NGFRP08138 427 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 MDKP21741 143 aaPredicted RBP11.46□□□□□ -0.57
SCN1B-202ENST00000415950 FGF7P21781 194 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 ABCD3P28288 659 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 PEBP1P30086 187 aaKnown RBP11.46□□□□□ -0.57
SCN1B-202ENST00000415950 DMWDQ09019 674 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 TGIF1Q15583 401 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 KISS1Q15726 138 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 CXorf67Q86X51 503 aaPredicted RBP11.46□□□□□ -0.57
SCN1B-202ENST00000415950 POLDIP2Q9Y2S7 368 aa11.46□□□□□ -0.57
SCN1B-202ENST00000415950 CHD5Q8TDI0 1954 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 PNLIPRP2P54317 469 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 LGALS4P56470 323 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 ERVFC1-1P60608 527 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 AWAT1Q58HT5 328 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 RGS7BPQ6MZT1 257 aaPredicted RBP11.46□□□□□ -0.58
SCN1B-202ENST00000415950 C19orf48Q6RUI8 117 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 CLEC18BQ6UXF7 455 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 Q6ZS52 159 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 LRP11Q86VZ4 500 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 CMTM3Q96MX0 182 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 DECR2Q9NUI1 292 aa11.46□□□□□ -0.58
SCN1B-202ENST00000415950 IGKV1D-16P01601 117 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 CAPZBP47756 277 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 FGF8P55075 233 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ADPRHL1Q8NDY3 354 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ZNRF4Q8WWF5 429 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 EDEM2Q9BV94 578 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 TWSG1Q9GZX9 223 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 MRPS18BQ9Y676 258 aaKnown RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 GREB1LQ9C091 1923 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 IGHV5-51A0A0C4DH38 117 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 DBX1A6NMT0 343 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 SERPINE3A8MV23 424 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 LMX1BO60663 402 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 TTRP02766 147 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 CTSBP07858 339 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 HOXD4P09016 255 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ZBTB25P24278 435 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ACAA2P42765 397 aaKnown RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 GPM6AP51674 278 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 GGNBP1Q5YKI7 109 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ASB5Q8WWX0 329 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ZNHIT1O43257 154 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 DUS4LO95620 317 aaKnown RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 PTGFRP43088 359 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 LHFPL2Q6ZUX7 228 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ZNF573Q86YE8 665 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ARHGEF39Q8N4T4 335 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 GNRHR2Q96P88 292 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 RAB18Q9NP72 206 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 PTP4A3O75365 173 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 IGHV3-13P01766 116 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 IGHV3-7P01780 117 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 TMEM240Q5SV17 173 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 NT5CQ8TCD5 201 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 MMP26Q9NRE1 261 aa11.45□□□□□ -0.58
SCN1B-202ENST00000415950 ERRFI1Q9UJM3 462 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-202ENST00000415950 C7orf77A4D0Y5 90 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 K7EQM0 130 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 PLRG1O43660 514 aaKnown RBP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 PNPP00491 289 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 SLC25A1P53007 311 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 HIST1H3AP68431 136 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 MYBPHQ13203 477 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 EXT1Q16394 746 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 MRGPREQ86SM8 312 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 ZDHHC23Q8IYP9 409 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 GNB4Q9HAV0 340 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 LIN7CQ9NUP9 197 aaKnown RBP11.44□□□□□ -0.58
SCN1B-202ENST00000415950 RASL12Q9NYN1 266 aa11.44□□□□□ -0.58
SCN1B-202ENST00000415950 VSIG4Q9Y279 399 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms