RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR2T35Q8NGX2 323 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2L2Q8NH16 312 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMAP2Q8WU79 429 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 HIST1H2ACQ93077 130 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 YIPF5Q969M3 257 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 C10orf35Q96D05 121 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TCEAL4Q96EI5 215 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GUCD1Q96NT3 240 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 KLHDC3Q9BQ90 382 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 NICN1Q9BSH3 213 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 DCTN5Q9BTE1 182 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 PDCD10Q9BUL8 212 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 GSDMCQ9BYG8 508 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 CACYBPQ9HB71 228 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 MYOZ1Q9NP98 299 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM138Q9NPI0 162 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ASCL3Q9NQ33 180 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SIRT7Q9NRC8 400 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 NECAP2Q9NVZ3 263 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TVP23BQ9NYZ1 205 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 DNAJC27Q9NZQ0 273 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF107Q9UII5 783 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC6A5Q9Y345 797 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMED7Q9Y3B3 224 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF106Q9H2Y7 1883 aaKnown RBP3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 PLXNB2O15031 1838 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 PAPPA2Q9BXP8 1791 aa3.04□□□□□ -1.92
HMGB3P23-201ENST00000414981 ALPK3Q96L96 1907 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 NLRC5Q86WI3 1866 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 TRBV4-1A0A0J9YWV2 114 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 GNG14A0A1W2PPG7 69 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC5A10A0PJK1 596 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CIB4A0PJX0 185 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 FRG2CA6NGY1 282 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 G3V3Q6 166 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 M0R296 226 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 DNASE2O00115 360 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SULT1C2O00338 296 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF593O00488 134 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 XRCC2O43543 280 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SSNA1O43805 119 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 POP7O75817 140 aaKnown RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 NDUFA7O95182 113 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 LRATO95237 230 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 TXNDC12O95881 172 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 HPP00738 406 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 IFI6P09912 130 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 PIRTP0C851 137 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SMIM6P0DI80 62 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 C1GALT1C1LP0DN25 315 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 NR2C1P13056 603 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 RNH1P13489 461 aaKnown RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 FOLR2P14207 255 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 GABRA1P14867 456 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SPI1P17947 270 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CELP19835 753 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 RAB3BP20337 219 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 PMELP40967 661 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR1E2P47887 323 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 DUSP3P51452 185 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 RIDAP52758 137 aaKnown RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 LIM2P55344 173 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CTBP2P56545 445 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 RHOAP61586 193 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 DCDP81605 110 aaKnown RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CYCSP99999 105 aaKnown RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 MXD1Q05195 221 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 BCL2L1Q07817 233 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 ST3GAL3Q11203 375 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 STX4Q12846 297 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 C1orf61Q13536 156 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR2F1Q13607 317 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDNFQ49AH0 187 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 UBE2NLQ5JXB2 153 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC35D3Q5M8T2 416 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 LY6G6FQ5SQ64 297 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 C10orf91Q5T1B1 145 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 UTF1Q5T230 341 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 C3orf33Q6P1S2 294 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 TMEM91Q6ZNR0 172 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 C19orf35Q6ZS72 473 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 H2BFWTQ7Z2G1 175 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 COMMD6Q7Z4G1 85 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 RANBP3LQ86VV4 465 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 THOC6Q86W42 341 aaKnown RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 TGIF2LXQ8IUE1 241 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SPAG16Q8N0X2 631 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SYS1Q8N2H4 156 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CDRT4Q8N9R6 151 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 MORN4Q8NDC4 146 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 GPR32P1Q8NGA4 272 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR4K5Q8NGD3 323 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR4D10Q8NGI6 311 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR10J5Q8NHC4 309 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 NANPQ8TBE9 248 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SFXN5Q8TD22 340 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 MAL2Q969L2 176 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms