RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ZNF273Q14593 569 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 CNN3Q15417 329 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 TPRX1Q8N7U7 411 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 CCDC54Q8NEL0 328 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 OR5D18Q8NGL1 313 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 OR13C9Q8NGT0 318 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 CNIH3Q8TBE1 160 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 SSMEM1Q8WWF3 244 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 PP6455Q8WZ26 134 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 EMG1Q92979 244 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 MRPL48Q96GC5 212 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 PDCD1LG2Q9BQ51 273 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZNF649Q9BS31 505 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZNF747Q9BV97 191 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 METTL8Q9H825 291 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 HES4Q9HCC6 221 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 RBFOX1Q9NWB1 397 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 SMPD3Q9NY59 655 aaPredicted RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 HHLA2Q9UM44 414 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 RPL36Q9Y3U8 105 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 TMEM82A0PJX8 343 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 GPR137BO60478 399 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 WBP4O75554 376 aaKnown RBP8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 PAHP00439 452 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 IGHA1P01876 353 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 ISG15P05161 165 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 CHRM2P08172 466 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 PRKACAP17612 351 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 PRKACBP22694 351 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 COX7A1P24310 79 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 SAA4P35542 130 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 IER3P46695 156 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 SOX2P48431 317 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 CCR9P51686 369 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 UBE2E1P51965 193 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 RELBQ01201 579 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 GUCA2AQ02747 115 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 SCN1BQ07699 218 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 SRSF4Q08170 494 aaKnown RBP8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 RAB40BQ12829 278 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 EDDM3AQ14507 147 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 RCN1Q15293 331 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZSCAN26Q16670 478 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 KLHL22Q53GT1 634 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 HCP5Q6MZN7 132 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 FDX2Q6P4F2 183 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZNF782Q6ZMW2 699 aaPredicted RBP8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 C1orf122Q6ZSJ8 110 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 OR52N4Q8NGI2 321 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 C10orf35Q96D05 121 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 CHST6Q9GZX3 395 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 NEK6Q9HC98 313 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 C1RLQ9NZP8 487 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 GSTK1Q9Y2Q3 226 aa8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 CAB39Q9Y376 341 aaPredicted RBP8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 SF3B6Q9Y3B4 125 aaKnown RBP8.32□□□□□ -1.08
NCKIPSD-202ENST00000413374 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 TRBV2A0A0J9YWF9 115 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 K7N7A8 449 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZFPL1O95159 310 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 HAND1O96004 215 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 CYB5AP00167 134 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 FBP1P09467 338 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 LIMS3P0CW19 117 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 LIMS4P0CW20 117 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 GABRR1P24046 479 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 PEX2P28328 305 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 ETV1P50549 477 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 RAG2P55895 527 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 PDZK1IP1Q13113 114 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 TAF9Q16594 264 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 OR2G6Q5TZ20 316 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZNF691Q5VV52 312 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 NCR3LG1Q68D85 454 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 METAP1DQ6UB28 335 aaPredicted RBP8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 LHFPL2Q6ZUX7 228 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 UTS2BQ765I0 119 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 GDPD3Q7L5L3 318 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 FAM58AQ8N1B3 248 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 SYS1Q8N2H4 156 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 C11orf42Q8N5U0 333 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 TMEM86BQ8N661 226 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 DNAAF1Q8NEP3 725 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 OR5D13Q8NGL4 314 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 OR5AK2Q8NH90 309 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 TSEN15Q8WW01 171 aaKnown RBP8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 DMRTB1Q96MA1 342 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 OPALINQ96PE5 141 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 NKX3-1Q99801 234 aaPredicted RBP8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 DPAGT1Q9H3H5 408 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZCCHC4Q9H5U6 513 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 MRPS18AQ9NVS2 196 aaKnown RBP8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 ING3Q9NXR8 418 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 CLEC2DQ9UHP7 191 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 DHDHQ9UQ10 334 aa8.31□□□□□ -1.08
NCKIPSD-202ENST00000413374 A0A1W2PPH5 198 aa8.3□□□□□ -1.08
NCKIPSD-202ENST00000413374 SIRPB1O00241 398 aa8.3□□□□□ -1.08
NCKIPSD-202ENST00000413374 ZNF737O75373 536 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms