RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FAM231DQ6ZW35 169 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 OR52E4Q8NGH9 312 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 OR10G6Q8NH81 332 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 TCEAL3Q969E4 200 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 PPCDCQ96CD2 204 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 SMARCD1Q96GM5 515 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 FMC1Q96HJ9 113 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 WFIKKN1Q96NZ8 548 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 SUCNR1Q9BXA5 334 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 CENPHQ9H3R5 247 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 FBXL15Q9H469 300 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 MRPL40Q9NQ50 206 aaKnown RBP3.26□□□□□ -1.89
BRCA1-204ENST00000412061 OPN4Q9UHM6 478 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 STOML2Q9UJZ1 356 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 TNRQ92752 1358 aa3.26□□□□□ -1.89
BRCA1-204ENST00000412061 IGKV1-27A0A075B6S5 117 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 A0A1B0GXF2 115 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 VGLL3A8MV65 326 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 I3L4J1 428 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 MANBAO00462 879 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 DENRO43583 198 aaKnown RBP3.25□□□□□ -1.89
BRCA1-204ENST00000412061 FOXH1O75593 365 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 MMP23AO75900 390 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 DCTN3O75935 186 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 TNNC2P02585 160 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 MRPL3P09001 348 aaKnown RBP3.25□□□□□ -1.89
BRCA1-204ENST00000412061 HIST1H1EP10412 219 aaKnown RBP3.25□□□□□ -1.89
BRCA1-204ENST00000412061 CD99P14209 185 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 SPNP16150 400 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 ZNF17P17021 662 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 GABRR1P24046 479 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 RPL12P30050 165 aaKnown RBP3.25□□□□□ -1.89
BRCA1-204ENST00000412061 ADORA1P30542 326 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 PMELP40967 661 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 SLCO1A2P46721 670 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 LGALS7P47929 136 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 MEOX2P50222 304 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 TCL1AP56279 114 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 FAM3AP98173 230 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 IFITM3Q01628 133 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 PPP1R1AQ13522 171 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 GUK1Q16774 197 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 Q1RN00 199 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 CLEC12BQ2HXU8 276 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 LRRC26Q2I0M4 334 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 ORMDL2Q53FV1 153 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 OPN5Q6U736 354 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 CLEC19AQ6UXS0 136 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 ACP7Q6ZNF0 438 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 S100A7AQ86SG5 101 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 CALHM1Q8IU99 346 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 NPBQ8NG41 125 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 DCAKDQ8WVC6 231 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 DEFB126Q9BYW3 111 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.25□□□□□ -1.89
BRCA1-204ENST00000412061 ZNF337Q9Y3M9 751 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 CSAG2Q9Y5P2 127 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 ENPP4Q9Y6X5 453 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 MN1Q10571 1320 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-204ENST00000412061 PLEKHG1Q9ULL1 1385 aa3.25□□□□□ -1.89
BRCA1-204ENST00000412061 COL5A2P05997 1499 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 TRAV8-2A0A0B4J237 113 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SRRM5B3KS81 715 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 KCNK1O00180 336 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 PGRMC1O00264 195 aaKnown RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SUPT3HO75486 399 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 KRT75O95678 551 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SERPINA1P01009 418 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 HLA-DPB1P04440 258 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 FABP1P07148 127 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SSTR5P35346 364 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 CCL23P55773 120 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 OR4D2P58180 307 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 RAB14P61106 215 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 PPIDQ08752 370 aaKnown RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 ZNF235Q14590 738 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 KIAA0040Q15053 153 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 ATAD3CQ5T2N8 411 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 DGAT2L6Q6ZPD8 337 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 NT5DC3Q86UY8 548 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 MYPOPQ86VE0 399 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 GATD1Q8NB37 220 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 C20orf203Q8NBC4 194 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 OR4P4Q8NGL7 312 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 OR4C13Q8NGP0 309 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 RHOXF1Q8NHV9 184 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SLC37A2Q8TED4 501 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 ASB13Q8WXK3 278 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 C1orf147Q96MC9 270 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SPACA5Q96QH8 159 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 PLEKHF1Q96S99 279 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 EBNA1BP2Q99848 306 aaKnown RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 SAMD10Q9BYL1 202 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 PARP12Q9H0J9 701 aaKnown RBP3.24□□□□□ -1.89
BRCA1-204ENST00000412061 OR51E2Q9H255 320 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 POMKQ9H5K3 350 aa3.24□□□□□ -1.89
BRCA1-204ENST00000412061 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms