RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SLC35A4Q96G79 324 aa4.12□□□□□ -1.75
PTPN13-202ENST00000411767 ZIC5Q96T25 663 aa4.12□□□□□ -1.75
PTPN13-202ENST00000411767 HSD17B14Q9BPX1 270 aa4.12□□□□□ -1.75
PTPN13-202ENST00000411767 COA4Q9NYJ1 87 aa4.12□□□□□ -1.75
PTPN13-202ENST00000411767 PLEKHB1Q9UF11 243 aaPredicted RBP4.12□□□□□ -1.75
PTPN13-202ENST00000411767 WSB1Q9Y6I7 421 aa4.12□□□□□ -1.75
PTPN13-202ENST00000411767 V9GYY9 64 aa4.12□□□□□ -1.75
PTPN13-202ENST00000411767 ZFAND5O76080 213 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 HRH1P35367 487 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TM4SF20Q53R12 229 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 C7orf43Q8WVR3 580 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 LINC00052Q96N35 136 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PPP6CO00743 305 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 NDUFS5O43920 106 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 SURF2Q15527 256 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 Q499Y3 187 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 GGTA1PQ4G0N0 100 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 Q6ZSR6 202 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CTU1Q7Z7A3 348 aaKnown RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 UBE2DNLQ8IWF7 75 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PELI3Q8N2H9 469 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IL17REQ8NFR9 667 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CNIH3Q8TBE1 160 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 NPY6RQ99463 290 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 SLX1AQ9BQ83 275 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM126AQ9H061 195 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TAAR2Q9P1P5 351 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 RABAC1Q9UI14 185 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TNFRSF18Q9Y5U5 241 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 ZCCHC11Q5TAX3 1644 aaKnown RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CNTNAP1P78357 1384 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TTC37Q6PGP7 1564 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CACNA1FO60840 1977 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 MAGI2Q86UL8 1455 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TRBV9A0A0B4J1U6 114 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IDSB3KWA1 339 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 LEPROTL1O95214 131 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 GRPP07492 148 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 HLA-DRB3P79483 266 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PSG9Q00887 426 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 ID2Q02363 134 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PCSK4Q6UW60 755 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TDHQ8IZJ6 230 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PP6455Q8WZ26 134 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 ABHD17AQ96GS6 310 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PAXXQ9BUH6 204 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 WDR76Q9H967 626 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 SLC23A1Q9UHI7 598 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 FANCAO15360 1455 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 HMGN2P05204 90 aaKnown RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 GALNSP34059 522 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CAPZBP47756 277 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PIGFQ07326 219 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IHHQ14623 411 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 DMRTA1Q5VZB9 504 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 MBLAC2Q68D91 279 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CMC1Q7Z7K0 106 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 FAM72BQ86X60 149 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 OR1P1Q8NH06 330 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PAAF1Q9BRP4 392 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF2Q9BSG1 426 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 GALPQ9UBC7 116 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TIMM13Q9Y5L4 95 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 OGG1O15527 345 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 ISG15P05161 165 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 MPC1LP0DKB6 136 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IAPPP10997 89 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IL11P20809 199 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TIA1P31483 386 aaKnown RBP eCLIP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 LRRC52Q8N7C0 313 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TMED7Q9Y3B3 224 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM30CPA0ZSE6 113 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TAX1BP3O14907 124 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 TSPAN2O60636 221 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 P2RY4P51582 365 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PTP4A2Q12974 167 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PHF13Q86YI8 300 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 RNF113BQ8IZP6 322 aaKnown RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 FAM71CQ8NEG0 241 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 EAF2Q96CJ1 260 aaPredicted RBP4.11□□□□□ -1.75
PTPN13-202ENST00000411767 FCRL5Q96RD9 977 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 NPCDR1Q9BY65 106 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 SLC17A9Q9BYT1 436 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 AKIP1Q9NQ31 210 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 FBXL12Q9NXK8 326 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 SLCO3A1Q9UIG8 710 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 SLC5A6Q9Y289 635 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IQGAP3Q86VI3 1631 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 CCL16O15467 120 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 FRS3O43559 492 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 IGHV4-39P01824 125 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 UBE2AP49459 152 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 PMP22Q01453 160 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 OR52N5Q8NH56 324 aa4.11□□□□□ -1.75
PTPN13-202ENST00000411767 P2RY11Q96G91 374 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms