RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SELENOFO60613 162 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 TNFSF13O75888 250 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 TOXO94900 526 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 SYNGR4O95473 234 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 RENP00797 406 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 IGHV3-13P01766 116 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 IGHG1P01857 330 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 GYPBP06028 91 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 CDK1P06493 297 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 STSP08842 583 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 RPSAP08865 295 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 HOXD4P09016 255 aaPredicted RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 PSKH1P11801 424 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 GABRA1P14867 456 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 C4BPBP20851 252 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PCMT1P22061 227 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PAICSP22234 425 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 CRABP1P29762 137 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 AGTR1P30556 359 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 GPR183P32249 361 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PYCR1P32322 319 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 ZNF85Q03923 595 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 FMODQ06828 376 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 RAB40BQ12829 278 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 C1DQ13901 141 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 FAM189A2Q15884 450 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PCK2Q16822 640 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 THEM4Q5T1C6 240 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 C1orf185Q5T7R7 199 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 RIPPLY2Q5TAB7 128 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 ZNF773Q6PK81 442 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 B3GLCTQ6Y288 498 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 TMEM182Q6ZP80 229 aaPredicted RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 AHSA2Q719I0 299 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PRSS48Q7RTY5 328 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 NUFIP2Q7Z417 695 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 DOLPP1Q86YN1 238 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 C20orf196Q8IYI0 205 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 RPRMLQ8N4K4 120 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 ZNF540Q8NDQ6 660 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 ST6GALNAC3Q8NDV1 305 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 BPIFB6Q8NFQ5 453 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 SLC26A10Q8NG04 563 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 OR52I1Q8NGK6 324 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 OR5M9Q8NGP3 310 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 OR2T4Q8NH00 348 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 ST6GALNAC6Q969X2 333 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PLEKHA8Q96JA3 519 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 COPS4Q9BT78 406 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 CDCA4Q9BXL8 241 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 LINC00470Q9BZP3 86 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 OR51V1Q9H2C8 321 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 FNDC4Q9H6D8 234 aaPredicted RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 GPN1Q9HCN4 374 aaPredicted RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 AMBNQ9NP70 447 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 CCNB1IP1Q9NPC3 277 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 GLRX2Q9NS18 164 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 MRPL22Q9NWU5 206 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 SCN3BQ9NY72 215 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 GLTPQ9NZD2 209 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 EMC3Q9P0I2 261 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 ERVK-18Q9QC07 812 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 BLOC1S6Q9UL45 172 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 DIMT1Q9UNQ2 313 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 MOKQ9UQ07 419 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 NOSIPQ9Y314 301 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 LSM2Q9Y333 95 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 TPRKBQ9Y3C4 175 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 UGT2A1Q9Y4X1 527 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 HEATR1Q9H583 2144 aaKnown RBP3.4□□□□□ -1.86
CLK1-203ENST00000409769 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 IRGMA1A4Y4 181 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 OR6C65A6NJZ3 312 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ZNF726A6NNF4 738 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SLC16A7O60669 478 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SLC19A2O60779 497 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 MRPL33O75394 65 aaKnown RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 UPK3AO75631 287 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 RAB36O95755 333 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 PTHP01270 115 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 MT-ND2P03891 347 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CRHP06850 196 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 SBK2P0C263 348 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 LIMS3P0CW19 117 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 LIMS4P0CW20 117 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 NR2C1P13056 603 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ABOP16442 354 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ALOX5APP20292 161 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 DCKP27707 260 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 LAP3P28838 519 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CD79BP40259 229 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ALDH3B2P48448 385 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 CSNK1A1P48729 337 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 HCFC1P51610 2035 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 BLVRAP53004 296 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 HSF2Q03933 536 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 EMX1Q04741 257 aaPredicted RBP3.4□□□□□ -1.87
CLK1-203ENST00000409769 GLO1Q04760 184 aa3.4□□□□□ -1.87
CLK1-203ENST00000409769 ST3GAL4Q11206 333 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms