RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 DUSP13Q9UII6 198 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF222Q9UK12 451 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 OR52A1Q9UKL2 312 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 GTF2A1LQ9UNN4 478 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 PPIAL4AQ9Y536 164 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 A0A0A6YYH2 397 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 IGKV1D-43A0A0B4J1Z2 117 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 LOC107986453A0A1B0GWG9 222 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 A6NJ64 397 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 SULT1C2O00338 296 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 RBBP9O75884 186 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 NDUFB6O95139 128 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 H2BFMP0C1H6 154 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 MMP16P51512 607 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 EFNB2P52799 333 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 BIDP55957 195 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 C2orf76Q3KRA6 126 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 C1orf100Q5SVJ3 147 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 THEM4Q5T1C6 240 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF813Q6ZN06 617 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF584Q8IVC4 421 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 UEVLDQ8IX04 471 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 NKAIN3Q8N8D7 197 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 NOXO1Q8NFA2 376 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 OR13C3Q8NGS6 347 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 C11orf40Q8WZ69 217 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 GTF3AQ92664 365 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 TAF15Q92804 592 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 PPP1R14AQ96A00 147 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 PTX4Q96A99 478 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 SLC25A44Q96H78 314 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 JMJD8Q96S16 334 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 MED29Q9NX70 200 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 TAS2R4Q9NYW5 299 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 OPN4Q9UHM6 478 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 SCP2D1Q9UJQ7 156 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 HSPB11Q9Y547 144 aa10.74□□□□□ -0.69
CHRNA1-205ENST00000409542 VWFP04275 2813 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 TMEM272A0A1B0GTI8 110 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 LOC102725191A0A1B0GVB3 256 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 SNRPGP15A8MWD9 76 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ARPC1BO15143 372 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 SSNA1O43805 119 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ICMTO60725 284 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 FSHBP01225 129 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 IGHG1P01857 330 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ALDOBP05062 364 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 HKR1P10072 659 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 B4GALT1P15291 398 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 CXCL3P19876 107 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 HTR2CP28335 458 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 LAP3P28838 519 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 VEGFCP49767 419 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ERVS71-1P61550 626 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 RAB1AP62820 205 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 CCL8P80075 99 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 MRPS11P82912 194 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 GLDNQ6ZMI3 551 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF627Q7L945 461 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 LINC00346Q8IVM7 164 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 PAQR4Q8N4S7 273 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF431Q8TF32 576 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 DVL3Q92997 716 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 FOXRED1Q96CU9 486 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 DUX5Q96PT3 197 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF416Q9BWM5 594 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 FAM206AQ9NX38 181 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 TAAR3PQ9P1P4 343 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 CYB5R1Q9UHQ9 305 aa10.73□□□□□ -0.69
CHRNA1-205ENST00000409542 TMEM269A0A1B0GVZ9 245 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 H3BSH0 61 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 LDLRAD4O15165 306 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 AKR7A2O43488 359 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 IGHV2-5P01817 119 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 PGA3P0DJD8 388 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 CCL2P13500 99 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 PRSS3P35030 304 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 CAMK2DQ13557 499 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 KCNMB1Q16558 191 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 RHOUQ7L0Q8 258 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 LYPD6Q86Y78 171 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 SKA3Q8IX90 412 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 ELMOD2Q8IZ81 293 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 SPICQ8N5J4 248 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 OR6X1Q8NH79 312 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 DACT3Q96B18 629 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 ZNF436Q9C0F3 470 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 OR51B6Q9H340 312 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 C1orf198Q9H425 327 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 MOB1AQ9H8S9 216 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 GPN1Q9HCN4 374 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 NKIRAS2Q9NYR9 191 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 MGAT4AQ9UM21 535 aa10.72□□□□□ -0.69
CHRNA1-205ENST00000409542 FLVCR2Q9UPI3 526 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms