RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 UQCC2Q9BRT2 126 aa11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 LIN7BQ9HAP6 207 aa11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 BARX1Q9HBU1 254 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 STEAP1Q9UHE8 339 aa11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
CHRNA1-204ENST00000409323 CCDC168Q8NDH2 2452 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 A0A075B6Q4 140 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 PPIAL4EA0A075B759 164 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 PPIAL4DF5H284 164 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 AIPO00170 330 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 CRTAPO75718 401 aaPredicted RBP11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 PPIAL4FP0DN26 164 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 GPR6P46095 362 aaPredicted RBP11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 ART1P52961 327 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 RIN1Q13671 783 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 FAM166AQ6J272 317 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 ACP7Q6ZNF0 438 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 FAM90A1Q86YD7 464 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 OR6M1Q8NGM8 313 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 SLC25A46Q96AG3 418 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 FOXRED1Q96CU9 486 aaPredicted RBP11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 METTL9Q9H1A3 318 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 PPIAL4AQ9Y536 164 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
CHRNA1-204ENST00000409323 KDM4BO94953 1096 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 MPIG6BO95866 241 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 VSIG8P0DPA2 414 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 SELLP14151 372 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 ARSBP15848 533 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 ERVK11-1P61568 191 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 BTG1P62324 171 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 MRPS11P82912 194 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 SCN1BQ07699 218 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 ZNF181Q2M3W8 571 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 C2orf76Q3KRA6 126 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 ZNF404Q494X3 552 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 LYPD2Q6UXB3 125 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 C1orf87Q8N0U7 546 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 FAM58AQ8N1B3 248 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 MAPK1IP1LQ8NDC0 245 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 WFDC11Q8NEX6 87 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 PXT1Q8NFP0 134 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 OR6Q1Q8NGQ2 317 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 OR5H6Q8NGV6 325 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 OR10Z1Q8NGY1 313 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 C10orf105Q8TEF2 133 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 FAM3DQ96BQ1 224 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 Q96MF0 132 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
CHRNA1-204ENST00000409323 TMEM272A0A1B0GTI8 110 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 OOEPA6NGQ2 149 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 RFPL4AA6NLU0 287 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 RFPL4AL1F8VTS6 287 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 IGHV2-70P01814 119 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 CD37P11049 281 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 CFHR2P36980 270 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 GABRA2P47869 451 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 EFNB2P52799 333 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 UNC119Q13432 240 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 PEG10Q86TG7 708 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 CDH26Q8IXH8 852 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 LRRC75A-AS1Q8N1F1 130 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 FGFRL1Q8N441 504 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 ZSCAN4Q8NAM6 433 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 LGALS14Q8TCE9 139 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 TMEM246Q9BRR3 403 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 HES4Q9HCC6 221 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 NLKQ9UBE8 527 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 OR5V1Q9UGF6 321 aa11.8□□□□□ -0.52
CHRNA1-204ENST00000409323 OR2AT4A6NND4 320 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 LGALS8O00214 317 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 HSPB6O14558 160 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 NOS1APO75052 506 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 PSG2P11465 335 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 MGMTP16455 207 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 RORCP51449 518 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 PSMD7P51665 324 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 BMXP51813 675 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 TMEM33P57088 247 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 MICBQ29980 383 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 SMIM21Q3B7S5 101 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 ASCL4Q6XD76 172 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 SAXO1Q8IYX7 474 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 CD177Q8N6Q3 437 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 DTX3Q8N9I9 347 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 RAB1CQ92928 201 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 TIMD4Q96H15 378 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 CCL13Q99616 98 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 NICN1Q9BSH3 213 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 SELENOIQ9C0D9 397 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 TMEM165Q9HC07 324 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 HMG20AQ9NP66 347 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 MED13LQ71F56 2210 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 GEMIN2O14893 280 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms