RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 BBS5Q8N3I7 341 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 TTC29Q8NA56 475 aaPredicted RBP-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 OR9K2Q8NGE7 335 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 OR56B2PQ8NGI1 322 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 NT5C3BQ969T7 300 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 TMBIM1Q969X1 311 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 XPO6Q96QU8 1125 aaKnown RBP-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 Q9BRP9 147 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 MRPL20Q9BYC9 149 aaKnown RBP-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 UCK2Q9BZX2 261 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 ZYG11BQ9C0D3 744 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 SLC7A5P2Q9GIP4 190 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 SRRQ9GZT4 340 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 ARV1Q9H2C2 271 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 BABAM2Q9NXR7 383 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 TAS2R9Q9NYW1 312 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 VAX2Q9UIW0 290 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 FBXL3Q9UKT7 428 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 ANGPT4Q9Y264 503 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 PTPRKQ15262 1439 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 PCDH15Q96QU1 1955 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 KIAA2026Q5HYC2 2103 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 SETD1AO15047 1707 aaKnown RBP-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 CACNA1EQ15878 2313 aa-0.16□□□□□ -2.44
MIR548I3-201ENST00000408378 MIA3Q5JRA6 1907 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 ZNF608Q9ULD9 1512 aaPredicted RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 IGKV2D-26A0A0A0MRZ7 120 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 LECT2O14960 151 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 UPK1BO75841 260 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 GPR75O95800 540 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 PSKH1P11801 424 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 CPMP14384 443 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 INPP1P49441 399 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 PSMB2P49721 201 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 XKP51811 444 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 GBX2P52951 348 aaPredicted RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 RPL10AP62906 217 aaKnown RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 TRMT5Q32P41 509 aaKnown RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 HSDL1Q3SXM5 330 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 TTMPQ5BVD1 217 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 CLEC19AQ6UXS0 136 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 IGSF10Q6WRI0 2623 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 FAM58AQ8N1B3 248 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 NECAB1Q8N987 351 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 ZIC4Q8N9L1 334 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 FAM184AQ8NB25 1140 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 CYB561A3Q8NBI2 242 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 OR4A5Q8NH83 315 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 RNF133Q8WVZ7 376 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 ELMO1Q92556 727 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 TMIGD2Q96BF3 282 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 ODF3Q96PU9 254 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 SPACA5Q96QH8 159 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 GABRG3Q99928 467 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 SMR3AQ99954 134 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 MTG1Q9BT17 334 aaPredicted RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 OR51B5Q9H339 312 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 VCX3AQ9NNX9 186 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 PXMP2Q9NR77 195 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 RBM22Q9NW64 420 aaKnown RBP eCLIP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 NDUFB11Q9NX14 153 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 HYPKQ9NX55 129 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 SLC23A2Q9UGH3 650 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 RCL1Q9Y2P8 373 aaKnown RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 KLF13Q9Y2Y9 288 aaPredicted RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 MINOS1-NBL1R4GNA1 71 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 URGCP-MRPS24S4R325 110 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 UBN2Q6ZU65 1347 aa-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 DMBT1Q9UGM3 2413 aaPredicted RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 ZNF638Q14966 1978 aaKnown RBP-0.17□□□□□ -2.44
MIR548I3-201ENST00000408378 ARFGEF3Q5TH69 2177 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 BAZ2BQ9UIF8 2168 aaKnown RBP-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 PLEKHG2Q9H7P9 1386 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CACNA1SQ13698 1873 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 NAV3Q8IVL0 2385 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 SMCO3A2RU48 225 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 ARRDC5A6NEK1 342 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CXCL11O14625 94 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 NDUFS5O43920 106 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 HUS1O60921 280 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 TTC4O95801 387 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CD160O95971 181 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 GUSBP08236 651 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CLTAP09496 248 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 MYL2P10916 166 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CRABP1P29762 137 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 HTR2BP41595 481 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 GPR4P46093 362 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 IFNAR2P48551 515 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 HOXC5Q00444 222 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 SSX2Q16385 188 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CDC37Q16543 378 aaPredicted RBP-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 RPEL1Q2QD12 228 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 ZNF791Q3KP31 576 aaPredicted RBP-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 CLLU1OSQ5K130 101 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 C10orf91Q5T1B1 145 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 TMEM215Q68D42 235 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 NIT1Q86X76 327 aa-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.18□□□□□ -2.44
MIR548I3-201ENST00000408378 EIF1ADQ8N9N8 165 aaKnown RBP-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms