RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 WIPF1O43516 503 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 ZNF737O75373 536 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 COX7A1P24310 79 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 ACTC1P68032 377 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 ACTA1P68133 377 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 MEDAGQ5VYS4 303 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 ZNF782Q6ZMW2 699 aaPredicted RBP15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 OR5R1Q8NH85 324 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 C10orf35Q96D05 121 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 SSX3Q99909 188 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 IL36RNQ9UBH0 155 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 NOTCH1P46531 2555 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 H3BUX3 64 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 BMXP51813 675 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 DLX6P56179 175 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 TMEM244Q5VVB8 128 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 KCTD20Q7Z5Y7 419 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 EGFL6Q8IUX8 553 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 OR10AC1Q8NH08 325 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 PP6455Q8WZ26 134 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 FGGYQ96C11 551 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 LGALS12Q96DT0 336 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 PPA2Q9H2U2 334 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 HEXA-AS1Q9H8Q6 139 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 CLPXO76031 633 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 CHRM2P08172 466 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 GABRB1P18505 474 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 NPBWR2P48146 333 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 CNN3Q15417 329 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 FDX2Q6P4F2 183 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 ACBD7Q8N6N7 88 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 OR51A4Q8NGJ6 313 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 PELI1Q96FA3 418 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 SLC29A1Q99808 456 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 C16orf95Q9H693 158 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 RBFOX1Q9NWB1 397 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 EXOGQ9Y2C4 368 aaKnown RBP15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 GMPPBQ9Y5P6 360 aa15.68■□□□□ 0.1
SMARCB1-204ENST00000407422 TMEM82A0PJX8 343 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 J3QLW9 94 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 TSPAN9O75954 239 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 ISG15P05161 165 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 CALCBP10092 127 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 ZNF19P17023 458 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 TGFBR2P37173 567 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 RBP2P50120 134 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 EDDM3BP56851 147 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 LY6EQ16553 131 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 SLC35E4Q6ICL7 350 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 ENTHD1Q8IYW4 607 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 PPP1R35Q8TAP8 253 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 EMG1Q92979 244 aaKnown RBP15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 C4orf36Q96KX1 117 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 MEGF9Q9H1U4 602 aa15.67■□□□□ 0.1
SMARCB1-204ENST00000407422 KIAA2026Q5HYC2 2103 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 hCG_1809904A0A1W2PP81 198 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 A0A1W2PPE2 198 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 A0A1W2PR64 198 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 A0A1W2PRV1 198 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 C17orf98A8MV24 154 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 KCNAB3O43448 404 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 IGHA1P01876 353 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 HTR1AP08908 422 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 ATF1P18846 271 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 BCL3P20749 454 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 AZGP1P25311 298 aaKnown RBP15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 DUSP1P28562 367 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 POU3F4P49335 361 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 ATP1B3P54709 279 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 MTCP1P56278 107 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 ZNF91Q05481 1191 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 UTS2BQ765I0 119 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 RNF144BQ7Z419 303 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 LHFPL3Q86UP9 236 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 OR8H2Q8N162 312 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 DNAAF1Q8NEP3 725 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 AMBNQ9NP70 447 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 MYRFQ9Y2G1 1151 aa15.66■□□□□ 0.1
SMARCB1-204ENST00000407422 OR4C45A6NMZ5 311 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 HAND1O96004 215 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 ZNF20P17024 532 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 EDDM3AQ14507 147 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 LRRC75BQ2VPJ9 315 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 GDPD3Q7L5L3 318 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 TCF23Q7RTU1 214 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 LHFPL4Q7Z7J7 247 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 OR52N4Q8NGI2 321 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 RFT1Q96AA3 541 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 C9orf16Q9BUW7 83 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 ISG20L2Q9H9L3 353 aaKnown RBP15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 S100A14Q9HCY8 104 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 SNTNA6NMZ2 147 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 DBTP11182 482 aaKnown RBP15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 CCR9P51686 369 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 SNU13P55769 128 aaKnown RBP15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 ASPHD2Q6ICH7 369 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 FAM58AQ8N1B3 248 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 DYNAPQ8N1N2 210 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 TPRX1Q8N7U7 411 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 RHOXF1Q8NHV9 184 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms