RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GVQW1Q8N7I0 195 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 S100PBPQ96BU1 408 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 MRPS24Q96EL2 167 aaKnown RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 LINC00470Q9BZP3 86 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 MIXL1Q9H2W2 232 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.91□□□□□ -1.14
LIG4-202ENST00000405925 FAM206AQ9NX38 181 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 COL4A4P53420 1690 aaPredicted RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 TRGV10A0A0A0MS01 117 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 OR5H1A6NKK0 313 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 CRHP06850 196 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 SSTR2P30874 369 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 GPR12P47775 334 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 BTG1P62324 171 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 RPL23AP62750 156 aaKnown RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 FAM27E3Q08E93 113 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 PDZK1IP1Q13113 114 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 ENDOGQ14249 297 aaKnown RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 LRRC10Q5BKY1 277 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 C17orf107Q6ZR85 190 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 C17orf78Q8N4C9 275 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 TMEM45BQ96B21 275 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 ASCL3Q9NQ33 180 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 RDH8Q9NYR8 311 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 MSRB2Q9Y3D2 182 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 PCDHGA9Q9Y5G4 932 aaKnown RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 A0A1B0GV50 99 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 ADAM20O43506 726 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 OMGP23515 440 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 OR10X1Q8NGY0 326 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 FAM57AQ8TBR7 257 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 GALMQ96C23 342 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 ZNF488Q96MN9 340 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 RAB1BQ9H0U4 201 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 UBTD1Q9HAC8 227 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 DLL3Q9NYJ7 618 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 SPRR3Q9UBC9 169 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 CEP295Q9C0D2 2601 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 HTTP42858 3142 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 A0A1W2PP11 408 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 NXPH3O95157 252 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 IFNA2P01563 188 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 HOXB1P14653 301 aaPredicted RBP7.9□□□□□ -1.14
LIG4-202ENST00000405925 SNCAP37840 140 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 EFNB2P52799 333 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 ZNF616Q08AN1 781 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 RTP5Q14D33 572 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 RFPL4BQ6ZWI9 263 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 CADM3Q8N126 398 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 ARRDC1Q8N5I2 433 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 TERB2Q8NHR7 220 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 RTN4IP1Q8WWV3 396 aaPredicted RBP7.9□□□□□ -1.14
LIG4-202ENST00000405925 DEDD2Q8WXF8 326 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 OCEL1Q9H607 264 aa7.9□□□□□ -1.14
LIG4-202ENST00000405925 PHF3Q92576 2039 aaKnown RBP7.9□□□□□ -1.14
LIG4-202ENST00000405925 HEATR1Q9H583 2144 aaKnown RBP7.9□□□□□ -1.14
LIG4-202ENST00000405925 TRBV5-5A0A0J9YX44 114 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 RAB27BO00194 218 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 PIN1P1O15428 100 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 GPR137BO60478 399 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 CPN1P15169 458 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 TBR1Q16650 682 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 PIGYQ3MUY2 71 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 ABLIM2Q6H8Q1 611 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 TMEM229BQ8NBD8 167 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 EDARADDQ8WWZ3 215 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 MRPL13Q9BYD1 178 aaKnown RBP7.9□□□□□ -1.15
LIG4-202ENST00000405925 WDR13Q9H1Z4 485 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 TREM1Q9NP99 234 aa7.9□□□□□ -1.15
LIG4-202ENST00000405925 ZNF716A6NP11 495 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 BCL3P20749 454 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 GAS1P54826 345 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 SSBP1Q04837 148 aaKnown RBP7.89□□□□□ -1.15
LIG4-202ENST00000405925 FOXO1Q12778 655 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 PHYHD1Q5SRE7 291 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 UNQ6494/PRO21346Q6UXR6 183 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 OR10V1Q8NGI7 309 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 OR14K1Q8NGZ2 314 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 PIGMQ9H3S5 423 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 MYOZ1Q9NP98 299 aaPredicted RBP7.89□□□□□ -1.15
LIG4-202ENST00000405925 SF3B6Q9Y3B4 125 aaKnown RBP7.89□□□□□ -1.15
LIG4-202ENST00000405925 WNK2Q9Y3S1 2297 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 TRIM64A6NGJ6 449 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 TMPRSS2O15393 492 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 CD1AP06126 327 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 PIGPP57054 158 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 DBX2Q6ZNG2 339 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 SSX9Q7RTT3 188 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 MDS2Q8NDY4 140 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 YIPF5Q969M3 257 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 S1PR3Q99500 378 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 PURGQ9UJV8 347 aaKnown RBP7.89□□□□□ -1.15
LIG4-202ENST00000405925 SMLR1H3BR10 107 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 PYCARD-AS1I3L0S3 204 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 CLDN1O95832 211 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 APOA2P02652 100 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms