RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 DMDP11532 3685 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 DOCK7Q96N67 2140 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 C9J4A7 227 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 FAM157AC9JC47 383 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 LDLRAD4O15165 306 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CDC14BO60729 498 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 IGHV3-9P01782 118 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CXCL1P09341 107 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 OMGP23515 440 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 OTX2P32243 289 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 SNU13P55769 128 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 RPS23P62266 143 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 SLC35A1P78382 337 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 KISS1Q15726 138 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CLEC12BQ2HXU8 276 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 ADAM10O14672 748 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 TNFSF11O14788 317 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 NXPH3O95157 252 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 NAAAQ02083 359 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CNTNAP3Q9BZ76 1288 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 NMES1Q9C002 83 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 EGLN1Q9GZT9 426 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 PLEKHJ1Q9NW61 149 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 H0YL77 283 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CYB5BO43169 146 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 RAD51DO75771 328 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 TRGC2P03986 189 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CHRM2P08172 466 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 SOD3P08294 240 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CCNOP22674 350 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 SULT1A2P50226 295 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 CYCSP99999 105 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 PDCD1Q15116 288 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 ZNF239Q16600 458 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 EIF5AL1Q6IS14 154 aaKnown RBP13.15□□□□□ -0.3
ATG4B-206ENST00000405546 TOMM40LQ969M1 308 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 PISDQ9UG56 409 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 MUC3AQ02505 3323 aa13.15□□□□□ -0.3
ATG4B-206ENST00000405546 FAM221AA4D161 298 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 LCATP04180 440 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 MELTFP08582 738 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 CD37P11049 281 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 NR2C1P13056 603 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 ZDHHC22Q8N966 263 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 OR56B1Q8NGI3 324 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 SAT2Q96F10 170 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF700Q9H0M5 742 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 PRDM13Q9H4Q3 707 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 E9PLN8 166 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF708P17019 499 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 CCL20P78556 96 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 RPUSD3Q6P087 351 aaKnown RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 DOK3Q7L591 496 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 OR14L1PQ8NHC6 308 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF837Q96EG3 531 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 CDC6Q99741 560 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 WNT16Q9UBV4 365 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 A0A0A6YYD4 124 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 SFT2D2O95562 160 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 MSR1P21757 451 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 TAGLN2P37802 199 aaKnown RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 PTGDSP41222 190 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 MTCP1P56278 107 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 TMEM50BP56557 158 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 RPS18P62269 152 aaKnown RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 PCK2Q16822 640 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 C6orf201Q7Z4U5 140 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
ATG4B-206ENST00000405546 C20orf196Q8IYI0 205 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 OR5AS1Q8N127 324 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 GJC3Q8NFK1 279 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 LURAP1Q96LR2 239 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 SLC26A1Q9H2B4 701 aa13.14□□□□□ -0.31
ATG4B-206ENST00000405546 DBX1A6NMT0 343 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 OPRM1P35372 400 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 KHDC3LQ587J8 217 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 STX12Q86Y82 276 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 MRPL24Q96A35 216 aaKnown RBP13.13□□□□□ -0.31
ATG4B-206ENST00000405546 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATG4B-206ENST00000405546 HS3ST3B1Q9Y662 390 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 IGLV3-12A0A075B6K2 115 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 NSG1A0A0A6YYJ2 146 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 SPRY1O43609 319 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms