RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RPS2P15880 293 aaKnown RBP24.48■■□□□ 1.51
USP42-202ENST00000404008 TMEM249Q2WGJ8 235 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 C1orf100Q5SVJ3 147 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 ATPAF1Q5TC12 328 aaPredicted RBP24.48■■□□□ 1.51
USP42-202ENST00000404008 KCTD7Q96MP8 289 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 DNTTIP1Q9H147 329 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 RNF167Q9H6Y7 350 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 HMG20AQ9NP66 347 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 IL36GQ9NZH8 169 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 SCOCQ9UIL1 159 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 ZNF222Q9UK12 451 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 ING4Q9UNL4 249 aa24.48■■□□□ 1.51
USP42-202ENST00000404008 KNG1P01042 644 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 CD99P14209 185 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 AMY2BP19961 511 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 RSU1Q15404 277 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 C1orf159Q96HA4 380 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 S100A13Q99584 98 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 METTL9Q9H1A3 318 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 ELL3Q9HB65 397 aaPredicted RBP24.47■■□□□ 1.51
USP42-202ENST00000404008 IL36RNQ9UBH0 155 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 KAAG1Q9UBP8 84 aa24.47■■□□□ 1.51
USP42-202ENST00000404008 PDCD5O14737 125 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 ADAM20O43506 726 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 TFF1P04155 84 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 CALCBP10092 127 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 PRKACAP17612 351 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 CPT2P23786 658 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 MTNR1BP49286 362 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 AWAT2Q6E213 333 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 ELP2Q6IA86 826 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 GPR141Q7Z602 305 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 Q8NFD4 153 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 OR10K1Q8NGX5 313 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 NEIL1Q96FI4 390 aaPredicted RBP24.46■■□□□ 1.51
USP42-202ENST00000404008 CCL13Q99616 98 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 CTSZQ9UBR2 303 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 ACANP16112 2415 aa24.46■■□□□ 1.51
USP42-202ENST00000404008 RFPL4AA6NLU0 287 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 RFPL4AL1F8VTS6 287 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 TMPRSS2O15393 492 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 RPL5P46777 297 aaKnown RBP24.45■■□□□ 1.5
USP42-202ENST00000404008 PSMD7P51665 324 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 SEC61A1P61619 476 aaKnown RBP24.45■■□□□ 1.5
USP42-202ENST00000404008 FIP1L1Q6UN15 594 aaKnown RBP24.45■■□□□ 1.5
USP42-202ENST00000404008 GLIPR1L1Q6UWM5 242 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 ZNF788Q6ZQV5 615 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 NLRC3Q7RTR2 1065 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 TBC1D15Q8TC07 691 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 C1orf147Q96MC9 270 aaPredicted RBP24.45■■□□□ 1.5
USP42-202ENST00000404008 V9GY05 133 aa24.45■■□□□ 1.5
USP42-202ENST00000404008 FAM157AC9JC47 383 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 SLC22A1O15245 554 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 INHBBP09529 407 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 IGHV4-31P0DP07 118 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 FOSL1P15407 271 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 RAB3BP20337 219 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 BMXP51813 675 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 OR10A3P58181 314 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 FGF12P61328 243 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 CD177Q8N6Q3 437 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 OR8B3Q8NGG8 313 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 OR6M1Q8NGM8 313 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 GAFA1Q96PS6 74 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 OR8B2Q96RD0 313 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 OR14J1Q9UGF5 321 aa24.44■■□□□ 1.5
USP42-202ENST00000404008 A0A1B0GW55 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 NKX6-3A6NJ46 265 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 SLC17A2O00624 439 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 ZNF780AO75290 641 aaPredicted RBP24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L2P0CJ85 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L3P0CJ86 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L4P0CJ87 422 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L5P0CJ88 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L6P0CJ89 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L7P0CJ90 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 HTR2CP28335 458 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 PRDX2P32119 198 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 GABRA2P47869 451 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 CEBPDP49716 269 aaPredicted RBP24.43■■□□□ 1.5
USP42-202ENST00000404008 ZNF146Q15072 292 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 SPIN3Q5JUX0 258 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 FAM166AQ6J272 317 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4L9Q6RFH8 374 aaPredicted RBP24.43■■□□□ 1.5
USP42-202ENST00000404008 ZNF841Q6ZN19 808 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 SLC36A1Q7Z2H8 476 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 TPRA1Q86W33 373 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 FAM216BQ8N7L0 139 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 SDSLQ96GA7 329 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 DUX4Q9UBX2 424 aa24.43■■□□□ 1.5
USP42-202ENST00000404008 HTR3BO95264 441 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 SDC2P34741 201 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 PITPNBP48739 271 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 LSM3P62310 102 aaKnown RBP24.42■■□□□ 1.5
USP42-202ENST00000404008 GPR176Q14439 515 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 DGUOKQ16854 277 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 SLC22A6Q4U2R8 563 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 SLC16A12Q6ZSM3 486 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 NR2C2APQ86WQ0 139 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 ANKRD13BQ86YJ7 626 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms