RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ISG20L2Q9H9L3 353 aaKnown RBP4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 C19orf12Q9NSK7 152 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 FAM118AQ9NWS6 357 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 MTCH1Q9NZJ7 389 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 IL36RNQ9UBH0 155 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC7A11Q9UPY5 501 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 EXOGQ9Y2C4 368 aaKnown RBP4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 PCDHGB1Q9Y5G3 927 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 KPTNQ9Y664 436 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 KIAA2026Q5HYC2 2103 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR4C45A6NMZ5 311 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CLDN34H7C241 214 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 SPRY1O43609 319 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ANGPTL7O43827 346 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 NOS1APO75052 506 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 WBP4O75554 376 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 GATBO75879 557 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 UBCP0CG48 685 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 PIPP12273 146 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CCL3L1P16619 93 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF20P17024 532 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ATF1P18846 271 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 MDKP21741 143 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 PAX6P26367 422 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 PEX2P28328 305 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 DUSP1P28562 367 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 NPBWR2P48146 333 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 POU3F4P49335 361 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 FUT6P51993 359 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 SNU13P55769 128 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CAV3P56539 151 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ERVFRD-1P60508 538 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ERVK11-1P61568 191 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 IL24Q13007 206 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ALKBH1Q13686 389 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 GALEQ14376 348 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF273Q14593 569 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 RCN1Q15293 331 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZSCAN26Q16670 478 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMEM244Q5VVB8 128 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 HCP5Q6MZN7 132 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 C16orf87Q6PH81 154 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 FIP1L1Q6UN15 594 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 Q6YL49 198 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC25A26Q70HW3 274 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CMTM4Q8IZR5 234 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 KIR3DL3Q8N743 410 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF676Q8N7Q3 588 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ASCC1Q8N9N2 400 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR52I1Q8NGK6 324 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR13C3Q8NGS6 347 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR13C9Q8NGT0 318 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CNIH3Q8TBE1 160 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 C17orf50Q8WW18 174 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CYGBQ8WWM9 190 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 STMN2Q93045 179 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ITFG2Q969R8 447 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 BORCS8Q96FH0 119 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 SPACA5Q96QH8 159 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 CITED4Q96RK1 184 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF649Q9BS31 505 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 PKIBQ9C010 78 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 PRDM13Q9H4Q3 707 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZMAT3Q9HA38 289 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 HES4Q9HCC6 221 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 RBFOX1Q9NWB1 397 aaKnown RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 ERVK13-1Q9NX77 482 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 SMPD3Q9NY59 655 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 RASL12Q9NYN1 266 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 POLDIP2Q9Y2S7 368 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 TRRAPQ9Y4A5 3859 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 MEGF8Q7Z7M0 2845 aa4.72□□□□□ -1.65
HMGB1P20-201ENST00000402555 DSCAML1Q8TD84 2053 aa4.71□□□□□ -1.65
HMGB1P20-201ENST00000402555 TRBV23-1A0A0A0MS06 115 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 IGKV1-12A0A0C4DH73 117 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM82A0PJX8 343 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 MEIOCA2RUB1 952 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 SNTNA6NMZ2 147 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 H0YAE9 185 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 SLC1A7O00341 560 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 NPFFO15130 113 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 MPZL2O60487 215 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 FADS2O95864 444 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 SERPINA3P01011 423 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 KNG1P01042 644 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 IGKV1D-12P01611 117 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 TK1P04183 234 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ISG15P05161 165 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 LIMS3P0CW19 117 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 LIMS4P0CW20 117 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 BCL3P20749 454 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 COX7A1P24310 79 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 EEF1B2P24534 225 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 AZGP1P25311 298 aaKnown RBP4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 SAA4P35542 130 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 RBP2P50120 134 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 ETV1P50549 477 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 CCR9P51686 369 aa4.71□□□□□ -1.66
HMGB1P20-201ENST00000402555 GTF2A1P52655 376 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms